Gene Syncc9902_0503 details

Gene Information

• Locus tag: Syncc9902_0503
• Symbol: atpC
• ID: 3742270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: -
• Start bp: 516663
• End bp: 517073
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637770674
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_376515
• Protein GI: 78184080
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0445749
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCTCA CCCTCCGCGT GCTGGCACCA GACCAGAACG TGTTTGATGG CAGCGCCGAT 
GAGGTGATTC TGCCCAGCAC CACAGGTCAG CTCGGCATCT TGACCGGCCA CATCTCAATG 
CTCACCGCCA TTGATGTTGG TGTGTTGCGT GTTCGAGCGA ACGGCTCTTG GAATTCCATC 
GCCTTGATGG GCGGTTTTGC AGAAGTCGAT TCCGACGAAG TCACCGTTTT GGTGAACAAG 
GCTGAACTCG GCAGCAGCAT CGATGCCAAC GCCGCCGAAG CAGACTTTCA AAAGGCAACG 
ACCGCTGTTG CTGGTATGGA AGGCCAACCT GCATCACCTG AAAAAGTCAA GGCTCAACAG 
CAGCTCAATG AAGCGCGTGC TCGCATGCAA GCCAGCAAGT CGGCTGACTG A 

 

Protein sequence

MSLTLRVLAP DQNVFDGSAD EVILPSTTGQ LGILTGHISM LTAIDVGVLR VRANGSWNSI 
ALMGGFAEVD SDEVTVLVNK AELGSSIDAN AAEADFQKAT TAVAGMEGQP ASPEKVKAQQ 
QLNEARARMQ ASKSAD