Gene Syncc9902_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0490 
Symbol 
ID3742502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp505225 
End bp505926 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID637770661 
Producthypothetical protein 
Protein accessionYP_376502 
Protein GI78184067 
COG category 
COG ID 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTTC ATCAGCTCTT TCCCACTGCC ATCGCAACGG TGCAGTTGGC CTTGGATCCT 
TTGGATGTGG CAGGGCAGCT TCAGGTGCTG TTTGCCTTGC GAGGGGATGC GACCGGAAAT 
CCCGCAGATG GATGTGCCTG GACTGGCGAT CTCCATGGCG CGTGGCAATT GCATCAGCAC 
CCAGATTTCG CGGCGCTGAC GCAGCAGGTT GTGGATCAGG TGTGGACTTA TCTCGAAGCA 
GTGGGCTTTG AGCGTTCTCA AGTGGCCTTG CACCTCCAGC GATGTTGGCC CGTGCTGAGC 
GATTGGGATC AGGTGGTCGG TCGTCATCAC CATCCCAATG CCCATCTCAG CGCTGTGCTT 
TACCTCACCG GAAGCGGTTC AGGCGAGGAG GGAGTGCTGC GCCTTCAGGC GCCGCATCGG 
ATCAATGAAC TTGTTCCCGG ACTCGCTGTT GGCCATGGAG GCCCCATCGC TGAAGGACAT 
CCGCTCAATG CCGATCACTG GGACCTTGCG CCTCGGGCCG GGCTGTTGGT GCTGTTTCCC 
TCCCGTTTGG ACCACAGCGT TTTGCCCAAC ACGGATCCAG AGGCGTTGCG TTGTTCGATC 
AGTTTTGATT TTGTGCTCAC GGCCCCAGAT GGCGACGATC CGGCGGAATA CTTGGCGCCG 
CATCCGAACG TGTGGGTCCA GCAAATCCCA CCCGCTGCCT GA
 
Protein sequence
MQLHQLFPTA IATVQLALDP LDVAGQLQVL FALRGDATGN PADGCAWTGD LHGAWQLHQH 
PDFAALTQQV VDQVWTYLEA VGFERSQVAL HLQRCWPVLS DWDQVVGRHH HPNAHLSAVL 
YLTGSGSGEE GVLRLQAPHR INELVPGLAV GHGGPIAEGH PLNADHWDLA PRAGLLVLFP 
SRLDHSVLPN TDPEALRCSI SFDFVLTAPD GDDPAEYLAP HPNVWVQQIP PAA