| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0480 |
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| Symbol | |
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| ID | 3742492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 495268 |
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| End bp | 498186 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637770651 |
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| Product | anchor polypeptide LCM |
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| Protein accession | YP_376492 |
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| Protein GI | 78184057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.320808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGA CCGCCAGCAG CGGCAGCCCG CGCGTGTCTC CTCAGCTGTT CGACACCCTG
CCGCTCTCCA GCGTTCGTCA GGCTGAACAG CAGGACCGCT TCCCTGATTC AGTCGAGCTG
TCCACGCTGG TGACCTTTTT CCGGAGCGGC CAAGACCGGC TGGAAGCCGC CCGAATCATG
GCGGCCAATG CAGAAGCGAT CGTGGCGCGA GCAGCCAATC GCATTTTTGT TGGCGGCACA
CCACTGTCGT TTTTGGATTC ACCTCTCACC ACGGGTGAGG CCATTCGAAC CACCGATGCA
ACCCCACTTG CCTCGGACCA AGCCGCATTC CAAGACTCAG TTCGCACCTT TACGGGCGAT
AGCGACAGCA CGAAAAGTGG GAATTTTCTC AGCCGATTAC TCGATGGCGC CGGGGGAGAT
GCGGATGTGC GCGTCGTCCT GCCCACTGGT TTCAACGCCA TCAGCGTTGC GAAGTACGGT
CCCGCCTTCA TGCGCAAATC CGTGCGGGAT ATGGGCTGGT TCCTGCGCTA CCTGGGCTAT
GCCCTCGTGG CTGGAGATCC CAGCATCCTT GCGGTGAACA CCAGGGGGCT GCGCGACATC
CTGCAGGCAA ACTGCTCGTT GGCTGCGACC AACGTTGCCC TTCAGGAGAT GCGGGCTGCA
TCAGCGCTTC TTTTGAAAGA TCGGCCAGAA GCACGCCAAT TGGCGATCGA CTGTTTCAAC
GTGTTGTTGA AAGAGCTATC GATTGCCACA CCGAGCACCC GGCAGCGACT GGGAAGCAAG
GTTCAGCAGG GATTACAACT ACCTGCCATC TATGCGTTGG CCTCCGAAGG AAGCCAACGT
TTCGAAATGC GGCCTGGCTT ATCAGGAGCA GAAAAGGCGG AGATCATCCG TGCGGCCTTC
CGCCAAGTGT TTGAGCGGGA TATCGCCAAG GGATATTCCC AAAATCCTTG CTCTGTGGAA
GCCAGCCAGG TTGTCCAGGG CCAGATTTCC ATGCGCGAAT ACGTACGCGC CCTTGGTCGT
AGCAAAGAAT ATCGACAGCA ATTTCACGAT CGGTTTGTGA ACAGCCGTGT GGTGGAGCTG
GCCTATCGCC ACTTCCTCGG TCGTGGGATT AGCTCGATCG AAGAGTTCAG AAAATCCTTT
GCAATCCTCA GCGCCCAGGG CCTGAATGGT TTGGTCGATG TTTTGGTGAA CTCCGCCGAA
TACGCCCAAA ATTTTGGCGA AGAAATGGTT CCTTACCTTC GCGAACTTGG CGAGGAAGCC
CAGGAAAGCG CTGGTTGGGG CTCTAACCGC AAATTGTTCA ACTTCAGTGC ACCGTTTGAA
GGGGCACCGC AGTACATCAC TCTGTACGCG TCCTACCGCC AACCCTTCGC CGATCAGCAC
GTCTACGGAG GCAGCAACGA TCCTGTCGGG AATCAGTACG GCGCCATCTT CCCCAGTGGA
ACAGCGTCGG TCCGCACACG GCCCGCGCCC TATGGCTATG ACAGCCGTCG CCTGCTGGTG
AGCAACGGCA TGGCCTCTCC CGGGCAGATG AACAGCACCC AGTTCCGAAA TAGCCGACCC
CGCAAGGTTG GCCCACGGGT GATGCGTCTC CAACAGATTG CCACCGGTGG TTCCGTCAAT
CCAAAACGTG GAGGGCAACC CAGCGTTCGA AATACGGAGT CCAGCACCCA AGCCGTGATC
AATGCGGTGT ACGTCCAGGT TTTAGGAAAT GCTGGTTACG CCGGCGAACG GCTGACTTCA
GCGGAAGCTC GCCTTGAAAA CGGAGACATT TGTCTTCGTG AGTTTGTCCG AAGCGTGGCC
CGCTCTGATG CATTCCGGCG CCGCTACTGG AGTGGCCTCT ACATCATCAA GGCGATTGAA
GTCATGCATC GGCGCCTCCT CGGACGGCCA ACCTTTGGAC GCTGGGAAAT TGATGCCTTG
TTTGATACAG CCGCACGCCA TGGGTTCTAT GGCGTGGTGG ATGCACTCGT CAACGGCGAG
GAATACAAGG ATTGCTTCGG GGAAGACACC GTTCCGTACG AACGCTTCAT CACCCCGAAA
GACTTGAATG TGAGACGAAC CGCCACGCTC ACGCGCGACG TGAAGCAATT CGGTTACGAC
AGCTCGTCGT TCGTCCTGGG AAGTCGCCCT GATGCGAGCA CCACACAAGT GTTTCGAGGC
AGCGGTGACG TCACACGACG GAATTTGGCC AGCGCAGCCA AAAGTTCCAG CGCTGATTGG
ACGAGCCTTG CCCGTAACTT CAGGCAAGGC GAAGACCTGC AGTCAAGCCT TCGCTTGATT
CGCCTCGGCG AACCGATTGG AGGTGGCCGA TCAACGCGTG GTTTTGGGCT CTCGAAAACG
AGATCGACAT CCTCAGCACC ACCACTCACC CCGATGACTG GGGCTCTATC TGCTATCTCC
GGCGCAGATG GCTACCGACT CCGCTCAAGC CTGCCAACAA ATCTTCGGTT AAATCGGCCT
TGCTCCGAAA GTGATTTGCG ATCAATCATT GATGCCACTT ACAAGCAAGT TCTCAACCGA
GTTCCGCTAC AAGATGAGCG TTTGATTGAA GCGGAATCAA GACTCCGCAA CAGCGACACA
TCGCTGAATC AATTCGTTGA AGAAATCGCC ATGAGTGATG CCTTCCAGAC GAGGCTGTTC
AACATGGCGC CCCTGAGAGC AGCGTCAGCG GCAACGTTGG CTCTGCTTGG TCGAGCCGCG
GCCCCTGCAG AGGTGAGCCG TTTTCTCACG ATCCGAGCTC AAGCGGGTCA ACCCGCTGCC
GTTAAGGAAC TACTCGAGAA GCGACCTGAT GGGGACACCG TTCCACGCAT GGATGGCATG
AATACCCGTG CAGGCGTGAG CCAAGCAACT CTGCAGCGAA CAGCTGCGCT GTATCGCGGT
AACGCCGCGA TCAATCCGTC CACGGAGGAC GCGATCTAA
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| Protein sequence | MTVTASSGSP RVSPQLFDTL PLSSVRQAEQ QDRFPDSVEL STLVTFFRSG QDRLEAARIM
AANAEAIVAR AANRIFVGGT PLSFLDSPLT TGEAIRTTDA TPLASDQAAF QDSVRTFTGD
SDSTKSGNFL SRLLDGAGGD ADVRVVLPTG FNAISVAKYG PAFMRKSVRD MGWFLRYLGY
ALVAGDPSIL AVNTRGLRDI LQANCSLAAT NVALQEMRAA SALLLKDRPE ARQLAIDCFN
VLLKELSIAT PSTRQRLGSK VQQGLQLPAI YALASEGSQR FEMRPGLSGA EKAEIIRAAF
RQVFERDIAK GYSQNPCSVE ASQVVQGQIS MREYVRALGR SKEYRQQFHD RFVNSRVVEL
AYRHFLGRGI SSIEEFRKSF AILSAQGLNG LVDVLVNSAE YAQNFGEEMV PYLRELGEEA
QESAGWGSNR KLFNFSAPFE GAPQYITLYA SYRQPFADQH VYGGSNDPVG NQYGAIFPSG
TASVRTRPAP YGYDSRRLLV SNGMASPGQM NSTQFRNSRP RKVGPRVMRL QQIATGGSVN
PKRGGQPSVR NTESSTQAVI NAVYVQVLGN AGYAGERLTS AEARLENGDI CLREFVRSVA
RSDAFRRRYW SGLYIIKAIE VMHRRLLGRP TFGRWEIDAL FDTAARHGFY GVVDALVNGE
EYKDCFGEDT VPYERFITPK DLNVRRTATL TRDVKQFGYD SSSFVLGSRP DASTTQVFRG
SGDVTRRNLA SAAKSSSADW TSLARNFRQG EDLQSSLRLI RLGEPIGGGR STRGFGLSKT
RSTSSAPPLT PMTGALSAIS GADGYRLRSS LPTNLRLNRP CSESDLRSII DATYKQVLNR
VPLQDERLIE AESRLRNSDT SLNQFVEEIA MSDAFQTRLF NMAPLRAASA ATLALLGRAA
APAEVSRFLT IRAQAGQPAA VKELLEKRPD GDTVPRMDGM NTRAGVSQAT LQRTAALYRG
NAAINPSTED AI
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