| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0448 |
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| Symbol | |
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| ID | 3742440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 464789 |
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| End bp | 466165 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637770618 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_376460 |
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| Protein GI | 78184025 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0687758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGTAG TATCAGCAAA GGATCATTCA CCAATTATTT CAAATCTAAA GAACGACAAC
AACAACACAT TGACTTTTGA GCAGCTAGAG CTTTGTGCTG AAACAGTCAG ATCGATAAAA
GAATCAGGAT ATCTATCACC AACACCAATC CAGGCCCTAA CGATTCCGGA GGTACTCCAG
GGAAAGGACA TTATGGCATC AGCCCAAACT GGAACAGGAA AAACTGCGGC TTTCATTTTA
CCTATTATCG AGTTACTTCG AGCAGAAGAT AAGCCAAAAC GATACCAAGT TCATTCTCTT
GTTCTCACAC CAACAAGGGA GTTAGCTGCA CAAGTTGAGG CCAGCGCGAA GGCGTACACA
AAATATCTAG CCTTACGATC TGATGCCGTT TTTGGTGGGG TTAGCATTCG CCCGCAAGTC
AAACGCCTAC AAGGTGGGGT CGACATTCTT GTAGCGACAC CAGGCCGTTT ACTCGATCTG
ATCAATCAGA AAATGATCCG ATTTGACAAT CTCAAAGTTT TAGTTCTCGA TGAAGCAGAC
CGGATGCTTG ATATGGGATT CATTAGGGAC ATCAAGAAAG TAATTGAGTA CCTGCCAAAA
AACCGCCAAA ATATGATGTT TTCGGCAACA TTTAGCACCC CAATCAAAAA GCTTGCCCTC
GGATTACTCA ACGATCCTGT TGAAATCAAA GCCTCAGTAC AAAATCAAGC CGCTCCCACA
ATTGAACATC TTGTTCATCC TTGCGACATG GCTCGCAAAG TTGACTTGCT CTGCCATCTC
ATCAAAACCA ACAAATGGAA GCAGGTTCTT GTGTTTGCAC GAACAAAACA TGGTGCCGAT
AAAGTCGTCA AAATTTTGTG CCATCAACAC ATGAGGGCAT CAGCCATTCA CGGAAATAAA
AGCCAAGGAG CACGAACCCG GGCACTCGAA GGATTTAAAA ATGGTGACAT CAAAATATTG
GTCGCAACAG ATATTGCCGC ACGGGGTATT GATATACATC AACTGCCATA TGTGATCAAT
CTTGATTTGC CAAATGTCGC GGAAGACTAT GTTCATCGTA TTGGACGAAC AGGTCGGGCC
GGTGAGGCTG GACATGCCAT TTCTTTAGTT GCAGCGGAAG AAGCCTTATT ACTCAAGGCG
ATTGAAAAAT TTATAGGCAA TCCACTCCCA AAAGTTGATG TTGTTGGATT TGAACAGAAG
ATTTTGAAAG CTGAACCGCT GAAGCAAGGC GGGCAACGCC AACGCCGACC TTCTCAATCA
GCACGGCCGG GTCAAAAGGC AAAAACTAAC CATGCCTCAT CACAACAACG AAGAAGTGAC
TGGAGAAAGT CATCGAATCG ATCAACACAG GGAGAGCGAA GAACACGACA ACGCTGA
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| Protein sequence | MGVVSAKDHS PIISNLKNDN NNTLTFEQLE LCAETVRSIK ESGYLSPTPI QALTIPEVLQ
GKDIMASAQT GTGKTAAFIL PIIELLRAED KPKRYQVHSL VLTPTRELAA QVEASAKAYT
KYLALRSDAV FGGVSIRPQV KRLQGGVDIL VATPGRLLDL INQKMIRFDN LKVLVLDEAD
RMLDMGFIRD IKKVIEYLPK NRQNMMFSAT FSTPIKKLAL GLLNDPVEIK ASVQNQAAPT
IEHLVHPCDM ARKVDLLCHL IKTNKWKQVL VFARTKHGAD KVVKILCHQH MRASAIHGNK
SQGARTRALE GFKNGDIKIL VATDIAARGI DIHQLPYVIN LDLPNVAEDY VHRIGRTGRA
GEAGHAISLV AAEEALLLKA IEKFIGNPLP KVDVVGFEQK ILKAEPLKQG GQRQRRPSQS
ARPGQKAKTN HASSQQRRSD WRKSSNRSTQ GERRTRQR
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