Gene Syncc9902_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0436 
Symbol 
ID3742733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp452046 
End bp452795 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content42% 
IMG OID637770606 
ProductBand 7 protein 
Protein accessionYP_376448 
Protein GI78184013 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.155422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA GCCTTCTAGG AATAACCGTG CTGGCCGTAG GTGGGATTGT GATTCTTTCG 
AGTGTATTTG TTGTTCCTGC TGGAAAGGTT GGTGTTGTTA CTACCCTTGG GAAGGTCTCA
AAAACCCCTA GGCTTCCAGG CCTAAATCTT AAACTGCCCT TTATTCAGAG CTCACATCTC
TTTAGCGTAA GGACAAAAGT TGTACCTGAG AAATTCTCAA CACTCACCAA GGATCTTCAG
GTCATTGAGG CGACTGCTAC GGTTAAATTT GCAGTAAAAC CAGACGAAGC GCCTCGTATC
TACAACACGA TTGCCAGCAA CGACGATAGT ATTTATGGCC GCGTTATTCA GCCATCTCTC
CTTAAATCCT TGAAGTCGGT GTTTTCGAAA TATGAACTAA ATACGATCGC TACCGATTGG
AATACGATAT CTACCTTGGT TGAAAAAAGT GTAGCAAAAG AGCTCAATAA GTTTGACTAT
GTTGCGGTTA AGGGATTAGA TCTTACCGGC CTAAAGATTG CGGAAGAATA CCGATCAGCT
ATTGAGCAAA AACAAATTGC AGAGCAACAA TTACTAAGAG CGAAAACTGA AGTGAAAATT
GCAGAGCAAG AAGCCCTTAA GTTTGAAACC CTCAATAGGG GATTAAATAA TCAGGTTTTG
TATAAGTTAT TTCTAGACAA ATGGGACGGT ACAACTAAAG TTGTTCCTGG TATTCAGGGT
GGAACCCCAC CGGTCATCGT TGGCAATTGA
 
Protein sequence
MSKSLLGITV LAVGGIVILS SVFVVPAGKV GVVTTLGKVS KTPRLPGLNL KLPFIQSSHL 
FSVRTKVVPE KFSTLTKDLQ VIEATATVKF AVKPDEAPRI YNTIASNDDS IYGRVIQPSL
LKSLKSVFSK YELNTIATDW NTISTLVEKS VAKELNKFDY VAVKGLDLTG LKIAEEYRSA
IEQKQIAEQQ LLRAKTEVKI AEQEALKFET LNRGLNNQVL YKLFLDKWDG TTKVVPGIQG
GTPPVIVGN