Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0425 |
Symbol | |
ID | 3742724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 438438 |
End bp | 442052 |
Gene Length | 3615 bp |
Protein Length | 1204 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770597 |
Product | chromosome segregation protein SMC |
Protein accession | YP_376439 |
Protein GI | 78184004 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.501211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTTACA TCAATCAGGT TGGCTTAAAG CACTTCAAGT CCTTCGGTGG GGCGATGACG ATCCCTCTTG AAGAGGGATT TACCGTTGTG ACCGGTCCCA ATGGATCCGG CAAAAGCAAC ATCCTTGATG GAGTGTTGTT TTGCCTGGGC CTAGCCAACA GCCGCGGAAT GCGAGCGGAT CGGCTACCAG ACCTGATCAA TAGCGGGGTT CTTAAAACCG GAAAAGCAGC CGAAACCTCG GTGAGCGTGA GGTTCGACCT CAATGATTGG GCACCCGACA CGGCGGAAGA CGGTCTCGAG GCTCCAGCAG AAGGTCCCTG GATTCAACCG GGGCAAAAGG AATGGACCGT GACGCGCAAG TTGCGGGTGA TGCCAGGTGG CTCCTACAGC TCGAGTTATT CCGCTGATGG GGTGCCCTGC AACCTCCAGC AGCTCCAAAC CCAATTGCGC CGTTTGCGCA TCGATCCGGA GGGGAGCAAC GTCGTGATGC AGGGCGATGT CACCCGCATC GTGTCGATGA GCAATCGCGA TCGCCGTGGG CTCATTGATG AACTTGCCGG TGTCGCTCTC TTCGATACGC GCATCGAACA AACGCGACGC AAACTCGACG ACGTTCAAGA GCGGCAAGAC CGCTGCCGAA TCATTGAGCA AGAGCTGCTG GCCAGCCGCC AGCGCCTGGA GAAAGACTGC GCCAAAGCCC GTCAATACCA AGATCTTCGT GAACGGTTGA AGCTCGGCCG CCAGCAGGAA ATGGTGCTGG CCTTTGAGGC TGCCGAACAA GCTCTCAAAG ACCTCAGCAC GCGCCAACAG GCCCTCGAAG CCCAAGAGCA ACGGGATGGC GTCGCCATCG CCAATGGACG GGAAGCCCTC AGCAAAGCCA GCGCCGAGCT GCAAATTCTT CAAGACCAGG TAAAAGCCCT TGGAGAAGAC CAGCTCCTGG CGGTTCAAGC CGAACTCGCA GGACTCGACA CCAGCAGCCG CGAACTGGAA CGTCAGGCCT CACAACACCA AGAAGAAGGG CAGCGGCTGC AAGGATTGCG TCATGACCTG ACCGTCCGTC GGCAGGAGTG GCAGCACCAA TCCAAAACCC AAGAGAAGGA TCCCCATCAA GACGCCTTAG CCGCTGCAGA AGACACCTGC CGTGCCTCTG AATCTGCCGT TGAGGTGTCC CGTCGCCGAC TAGCCGACGT TGCAGGCCGT TCTGGGGCTT GGTTAGACGA GCAAAAACGA CGTAGTGCTC GGCGGCAAGA GCTGCAAAGC AGCGTGAATC CCAAACTTGA AGAACAACAG CAACTGCAAG AACGGTTGCG TCAGGAGTCG GAACGGCTGC AAGAACTCCA TCTGGAACAG CAGCAAGACG GGGCTGATGA ACAGGATGTT CAACAGCAGC TCACCACCCT GGAGGAGAGC TGGCAAACGC TGATCCATGG GCTGTCTGAA GGCAAGCAAG CCCTGCAACA AACCGTGGAC TCCCTTGCCA TCCAACAACG AACCCGCAGT CGCTTAGAGC AAGAACAAAC CCGACTGGAA CGGGAAATTG CCCGTCTTGA AAGCCGCCGT GATGCCCTGC AAGAAAGCCG TGGCACCGGT GCGTTAAGGC TGCTGTTGGA GGCCGGTCTC GATGGCATTC ATGGGCCGGT CGCCCAACTT GGAGAAGTGC AGGATCAACA CCGCCTGGCC TTGGAAGTTG CTGCAGGCGC ACGTCTCAGC CAAGTCGTCG TCGACGACGA CCGCATTGCA GCAAGGGCGA TCGAACTGCT GAAAAGCCGT CGCGCCGGTC GGCTCACGTT TCTGCCCCTC AACAAAATTC GTGCACCAGG CGGTGGAAGC GGAAGCACCG CAGCAGCCTT CGCCCGCGGG GCGCGGCCGA GCGGCGATAC GGGCGGCGGA TTAATCGGCC GTGCCGTGGA ACTCGTGCGT TTTGAACCCG TTTACGACCA GGTCTTTGCC TATGTGTTCG GCGACACGCT GGTGTTTGCG GATCTCGCCA CCGCCCGGCA ACAACTCGGT CGATCGAGGG CCGTAACCCT GGACGGAGAA CTCCTCGAAA AAAGCGGTGC GATGACGGGC GGGAGCTTGT CACAACGCAG CGGAGGCCTG AGTTTTGGAC GTAGCCAGGA TCAAGATGAA GCCGAACCCC ACCGCCGCAG GCTCCTGGAG ATTGGGGAAT CCCTGGCAGC CTGTCGGCGC GAAGAATCCA AATTGACGCA ACTGCTCGAG CAGCAGAAAC CACAGCTGCG GGAGATGGAA CAACGCCAGG CCGGCCTCAT CGCCGAACGC AACGCAGCCC AACGGAACCA TGGCCCATTA CTTGAGCGCA ACCGACAGCG GGCGGAACGG TTATTGCGCC TTCAAAACGA ACAAACCACC CAACGGCAAC GGCTGGAGGT GATCGATGCA GCACTCAAAC CACTACAAGC GGAACTCGCA CAATTGAATG AAGCGGAACG CAACAGCGGT GATCACGACG ATGCCGCGGC CTGGCAACAG CTTCAACACG ACCTCGAGGC GGCTGATCAT CGTCTTGAAG CCGCGCGACA TGAGCGTGAT CTTCTTCTGA ATGCACAGCG TGAGCGGCAG CTCGCCCTCG AGCGTCTGGG GGACCAAGAG AAGGCCCTTG CAGCAGAAGA AACACGGCTC CAGGAGGCTG TTCAAGCCCT GGCCAAAGCC CATGGCGCGT GGCGCGATCA ACAGTCGGAA CTTCAAAACA AGCGAACGTC ATTAGAGGCT CAGCAACAAG ACCTCCAAGA GCGTTTCGGC ACCCAACGAC GAGCCCGCGA TGCCGCGGAA GCGGAGGTGG CCCGTCAACG CCAAGCCCTC CAGCAAGCCG AATGGAACCT TGAACGATTG AAGGAAGACC GCGAGGGCTT AATCGAGGAA CAGCGCAGCG GAGCGATTCG CTTAAGGGAA ATGGCAGAAG CACTGCCAGA CCCGCGTCCA GAGATCCCTG AGTCGATGCG ACTCGAAGGG TTAGAGGTTC TCCAGGGAGA ACTCCAAGCA ATCCAACGAC GCATGGAAGC GCTGGAGCCC GTGAACATGC TCGCCCTTGA GGAACTGCAA GCCCTGGAAC AACGCTTGGG TGACCTCAAC GAACGACTCG ATGTTTTGAA TAGTGAACGC GAAGAACTGC TGCTTCGCAT TGAGACCGTC GCCACCCTGC GCCAAGACGC CTTTATGGAG GCTTTCACCG CAGTGGATGG TCATTTCCGT GAAATTTTTG CTTCGCTCTC CGAAGGCGAT GGGCATCTGC AGTTGGAAAA CGCCGATGAA CCGCTCGAGG GGGGCCTCAC GCTTGTGGCC CATCCGAAAG GAAAAACCGT GCGGCGCTTG GCGTCGATGT CGGGTGGGGA GAAGTCGCTT ACAGCCCTCA GCTTTTTGTT TGCCTTACAA CGCTTCCGTC CCTCTCCCTT CTATGCCCTC GACGAGGTCG ACAGCTTCCT TGACGGCGTG AATGTGGAGC GATTAGCAGC ATTGATTGCC CGACAAGCCA AAGATGCCCA ATTCATGGTG GTGAGTCATA GGCGTCCGAT GATCGGCGCC TCAGAGCGCA CGATTGGCGT CACCCAAGCC CGCGGGGCCC ACACCCAAGT GGTTGGACTT CCCGATGCAG CCTGA
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Protein sequence | MVYINQVGLK HFKSFGGAMT IPLEEGFTVV TGPNGSGKSN ILDGVLFCLG LANSRGMRAD RLPDLINSGV LKTGKAAETS VSVRFDLNDW APDTAEDGLE APAEGPWIQP GQKEWTVTRK LRVMPGGSYS SSYSADGVPC NLQQLQTQLR RLRIDPEGSN VVMQGDVTRI VSMSNRDRRG LIDELAGVAL FDTRIEQTRR KLDDVQERQD RCRIIEQELL ASRQRLEKDC AKARQYQDLR ERLKLGRQQE MVLAFEAAEQ ALKDLSTRQQ ALEAQEQRDG VAIANGREAL SKASAELQIL QDQVKALGED QLLAVQAELA GLDTSSRELE RQASQHQEEG QRLQGLRHDL TVRRQEWQHQ SKTQEKDPHQ DALAAAEDTC RASESAVEVS RRRLADVAGR SGAWLDEQKR RSARRQELQS SVNPKLEEQQ QLQERLRQES ERLQELHLEQ QQDGADEQDV QQQLTTLEES WQTLIHGLSE GKQALQQTVD SLAIQQRTRS RLEQEQTRLE REIARLESRR DALQESRGTG ALRLLLEAGL DGIHGPVAQL GEVQDQHRLA LEVAAGARLS QVVVDDDRIA ARAIELLKSR RAGRLTFLPL NKIRAPGGGS GSTAAAFARG ARPSGDTGGG LIGRAVELVR FEPVYDQVFA YVFGDTLVFA DLATARQQLG RSRAVTLDGE LLEKSGAMTG GSLSQRSGGL SFGRSQDQDE AEPHRRRLLE IGESLAACRR EESKLTQLLE QQKPQLREME QRQAGLIAER NAAQRNHGPL LERNRQRAER LLRLQNEQTT QRQRLEVIDA ALKPLQAELA QLNEAERNSG DHDDAAAWQQ LQHDLEAADH RLEAARHERD LLLNAQRERQ LALERLGDQE KALAAEETRL QEAVQALAKA HGAWRDQQSE LQNKRTSLEA QQQDLQERFG TQRRARDAAE AEVARQRQAL QQAEWNLERL KEDREGLIEE QRSGAIRLRE MAEALPDPRP EIPESMRLEG LEVLQGELQA IQRRMEALEP VNMLALEELQ ALEQRLGDLN ERLDVLNSER EELLLRIETV ATLRQDAFME AFTAVDGHFR EIFASLSEGD GHLQLENADE PLEGGLTLVA HPKGKTVRRL ASMSGGEKSL TALSFLFALQ RFRPSPFYAL DEVDSFLDGV NVERLAALIA RQAKDAQFMV VSHRRPMIGA SERTIGVTQA RGAHTQVVGL PDAA
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