Gene Syncc9902_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0425 
Symbol 
ID3742724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp438438 
End bp442052 
Gene Length3615 bp 
Protein Length1204 aa 
Translation table11 
GC content59% 
IMG OID637770597 
Productchromosome segregation protein SMC 
Protein accessionYP_376439 
Protein GI78184004 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.501211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTACA TCAATCAGGT TGGCTTAAAG CACTTCAAGT CCTTCGGTGG GGCGATGACG 
ATCCCTCTTG AAGAGGGATT TACCGTTGTG ACCGGTCCCA ATGGATCCGG CAAAAGCAAC
ATCCTTGATG GAGTGTTGTT TTGCCTGGGC CTAGCCAACA GCCGCGGAAT GCGAGCGGAT
CGGCTACCAG ACCTGATCAA TAGCGGGGTT CTTAAAACCG GAAAAGCAGC CGAAACCTCG
GTGAGCGTGA GGTTCGACCT CAATGATTGG GCACCCGACA CGGCGGAAGA CGGTCTCGAG
GCTCCAGCAG AAGGTCCCTG GATTCAACCG GGGCAAAAGG AATGGACCGT GACGCGCAAG
TTGCGGGTGA TGCCAGGTGG CTCCTACAGC TCGAGTTATT CCGCTGATGG GGTGCCCTGC
AACCTCCAGC AGCTCCAAAC CCAATTGCGC CGTTTGCGCA TCGATCCGGA GGGGAGCAAC
GTCGTGATGC AGGGCGATGT CACCCGCATC GTGTCGATGA GCAATCGCGA TCGCCGTGGG
CTCATTGATG AACTTGCCGG TGTCGCTCTC TTCGATACGC GCATCGAACA AACGCGACGC
AAACTCGACG ACGTTCAAGA GCGGCAAGAC CGCTGCCGAA TCATTGAGCA AGAGCTGCTG
GCCAGCCGCC AGCGCCTGGA GAAAGACTGC GCCAAAGCCC GTCAATACCA AGATCTTCGT
GAACGGTTGA AGCTCGGCCG CCAGCAGGAA ATGGTGCTGG CCTTTGAGGC TGCCGAACAA
GCTCTCAAAG ACCTCAGCAC GCGCCAACAG GCCCTCGAAG CCCAAGAGCA ACGGGATGGC
GTCGCCATCG CCAATGGACG GGAAGCCCTC AGCAAAGCCA GCGCCGAGCT GCAAATTCTT
CAAGACCAGG TAAAAGCCCT TGGAGAAGAC CAGCTCCTGG CGGTTCAAGC CGAACTCGCA
GGACTCGACA CCAGCAGCCG CGAACTGGAA CGTCAGGCCT CACAACACCA AGAAGAAGGG
CAGCGGCTGC AAGGATTGCG TCATGACCTG ACCGTCCGTC GGCAGGAGTG GCAGCACCAA
TCCAAAACCC AAGAGAAGGA TCCCCATCAA GACGCCTTAG CCGCTGCAGA AGACACCTGC
CGTGCCTCTG AATCTGCCGT TGAGGTGTCC CGTCGCCGAC TAGCCGACGT TGCAGGCCGT
TCTGGGGCTT GGTTAGACGA GCAAAAACGA CGTAGTGCTC GGCGGCAAGA GCTGCAAAGC
AGCGTGAATC CCAAACTTGA AGAACAACAG CAACTGCAAG AACGGTTGCG TCAGGAGTCG
GAACGGCTGC AAGAACTCCA TCTGGAACAG CAGCAAGACG GGGCTGATGA ACAGGATGTT
CAACAGCAGC TCACCACCCT GGAGGAGAGC TGGCAAACGC TGATCCATGG GCTGTCTGAA
GGCAAGCAAG CCCTGCAACA AACCGTGGAC TCCCTTGCCA TCCAACAACG AACCCGCAGT
CGCTTAGAGC AAGAACAAAC CCGACTGGAA CGGGAAATTG CCCGTCTTGA AAGCCGCCGT
GATGCCCTGC AAGAAAGCCG TGGCACCGGT GCGTTAAGGC TGCTGTTGGA GGCCGGTCTC
GATGGCATTC ATGGGCCGGT CGCCCAACTT GGAGAAGTGC AGGATCAACA CCGCCTGGCC
TTGGAAGTTG CTGCAGGCGC ACGTCTCAGC CAAGTCGTCG TCGACGACGA CCGCATTGCA
GCAAGGGCGA TCGAACTGCT GAAAAGCCGT CGCGCCGGTC GGCTCACGTT TCTGCCCCTC
AACAAAATTC GTGCACCAGG CGGTGGAAGC GGAAGCACCG CAGCAGCCTT CGCCCGCGGG
GCGCGGCCGA GCGGCGATAC GGGCGGCGGA TTAATCGGCC GTGCCGTGGA ACTCGTGCGT
TTTGAACCCG TTTACGACCA GGTCTTTGCC TATGTGTTCG GCGACACGCT GGTGTTTGCG
GATCTCGCCA CCGCCCGGCA ACAACTCGGT CGATCGAGGG CCGTAACCCT GGACGGAGAA
CTCCTCGAAA AAAGCGGTGC GATGACGGGC GGGAGCTTGT CACAACGCAG CGGAGGCCTG
AGTTTTGGAC GTAGCCAGGA TCAAGATGAA GCCGAACCCC ACCGCCGCAG GCTCCTGGAG
ATTGGGGAAT CCCTGGCAGC CTGTCGGCGC GAAGAATCCA AATTGACGCA ACTGCTCGAG
CAGCAGAAAC CACAGCTGCG GGAGATGGAA CAACGCCAGG CCGGCCTCAT CGCCGAACGC
AACGCAGCCC AACGGAACCA TGGCCCATTA CTTGAGCGCA ACCGACAGCG GGCGGAACGG
TTATTGCGCC TTCAAAACGA ACAAACCACC CAACGGCAAC GGCTGGAGGT GATCGATGCA
GCACTCAAAC CACTACAAGC GGAACTCGCA CAATTGAATG AAGCGGAACG CAACAGCGGT
GATCACGACG ATGCCGCGGC CTGGCAACAG CTTCAACACG ACCTCGAGGC GGCTGATCAT
CGTCTTGAAG CCGCGCGACA TGAGCGTGAT CTTCTTCTGA ATGCACAGCG TGAGCGGCAG
CTCGCCCTCG AGCGTCTGGG GGACCAAGAG AAGGCCCTTG CAGCAGAAGA AACACGGCTC
CAGGAGGCTG TTCAAGCCCT GGCCAAAGCC CATGGCGCGT GGCGCGATCA ACAGTCGGAA
CTTCAAAACA AGCGAACGTC ATTAGAGGCT CAGCAACAAG ACCTCCAAGA GCGTTTCGGC
ACCCAACGAC GAGCCCGCGA TGCCGCGGAA GCGGAGGTGG CCCGTCAACG CCAAGCCCTC
CAGCAAGCCG AATGGAACCT TGAACGATTG AAGGAAGACC GCGAGGGCTT AATCGAGGAA
CAGCGCAGCG GAGCGATTCG CTTAAGGGAA ATGGCAGAAG CACTGCCAGA CCCGCGTCCA
GAGATCCCTG AGTCGATGCG ACTCGAAGGG TTAGAGGTTC TCCAGGGAGA ACTCCAAGCA
ATCCAACGAC GCATGGAAGC GCTGGAGCCC GTGAACATGC TCGCCCTTGA GGAACTGCAA
GCCCTGGAAC AACGCTTGGG TGACCTCAAC GAACGACTCG ATGTTTTGAA TAGTGAACGC
GAAGAACTGC TGCTTCGCAT TGAGACCGTC GCCACCCTGC GCCAAGACGC CTTTATGGAG
GCTTTCACCG CAGTGGATGG TCATTTCCGT GAAATTTTTG CTTCGCTCTC CGAAGGCGAT
GGGCATCTGC AGTTGGAAAA CGCCGATGAA CCGCTCGAGG GGGGCCTCAC GCTTGTGGCC
CATCCGAAAG GAAAAACCGT GCGGCGCTTG GCGTCGATGT CGGGTGGGGA GAAGTCGCTT
ACAGCCCTCA GCTTTTTGTT TGCCTTACAA CGCTTCCGTC CCTCTCCCTT CTATGCCCTC
GACGAGGTCG ACAGCTTCCT TGACGGCGTG AATGTGGAGC GATTAGCAGC ATTGATTGCC
CGACAAGCCA AAGATGCCCA ATTCATGGTG GTGAGTCATA GGCGTCCGAT GATCGGCGCC
TCAGAGCGCA CGATTGGCGT CACCCAAGCC CGCGGGGCCC ACACCCAAGT GGTTGGACTT
CCCGATGCAG CCTGA
 
Protein sequence
MVYINQVGLK HFKSFGGAMT IPLEEGFTVV TGPNGSGKSN ILDGVLFCLG LANSRGMRAD 
RLPDLINSGV LKTGKAAETS VSVRFDLNDW APDTAEDGLE APAEGPWIQP GQKEWTVTRK
LRVMPGGSYS SSYSADGVPC NLQQLQTQLR RLRIDPEGSN VVMQGDVTRI VSMSNRDRRG
LIDELAGVAL FDTRIEQTRR KLDDVQERQD RCRIIEQELL ASRQRLEKDC AKARQYQDLR
ERLKLGRQQE MVLAFEAAEQ ALKDLSTRQQ ALEAQEQRDG VAIANGREAL SKASAELQIL
QDQVKALGED QLLAVQAELA GLDTSSRELE RQASQHQEEG QRLQGLRHDL TVRRQEWQHQ
SKTQEKDPHQ DALAAAEDTC RASESAVEVS RRRLADVAGR SGAWLDEQKR RSARRQELQS
SVNPKLEEQQ QLQERLRQES ERLQELHLEQ QQDGADEQDV QQQLTTLEES WQTLIHGLSE
GKQALQQTVD SLAIQQRTRS RLEQEQTRLE REIARLESRR DALQESRGTG ALRLLLEAGL
DGIHGPVAQL GEVQDQHRLA LEVAAGARLS QVVVDDDRIA ARAIELLKSR RAGRLTFLPL
NKIRAPGGGS GSTAAAFARG ARPSGDTGGG LIGRAVELVR FEPVYDQVFA YVFGDTLVFA
DLATARQQLG RSRAVTLDGE LLEKSGAMTG GSLSQRSGGL SFGRSQDQDE AEPHRRRLLE
IGESLAACRR EESKLTQLLE QQKPQLREME QRQAGLIAER NAAQRNHGPL LERNRQRAER
LLRLQNEQTT QRQRLEVIDA ALKPLQAELA QLNEAERNSG DHDDAAAWQQ LQHDLEAADH
RLEAARHERD LLLNAQRERQ LALERLGDQE KALAAEETRL QEAVQALAKA HGAWRDQQSE
LQNKRTSLEA QQQDLQERFG TQRRARDAAE AEVARQRQAL QQAEWNLERL KEDREGLIEE
QRSGAIRLRE MAEALPDPRP EIPESMRLEG LEVLQGELQA IQRRMEALEP VNMLALEELQ
ALEQRLGDLN ERLDVLNSER EELLLRIETV ATLRQDAFME AFTAVDGHFR EIFASLSEGD
GHLQLENADE PLEGGLTLVA HPKGKTVRRL ASMSGGEKSL TALSFLFALQ RFRPSPFYAL
DEVDSFLDGV NVERLAALIA RQAKDAQFMV VSHRRPMIGA SERTIGVTQA RGAHTQVVGL
PDAA