Gene Syncc9902_0409 details

Gene Information

• Locus tag: Syncc9902_0409
• Symbol: def
• ID: 3742393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 425643
• End bp: 426248
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637770580
• Product: peptide deformylase
• Protein accession: YP_376423
• Protein GI: 78183988
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCGGGAA GCTTTGCGCA GTTGGCACGG GCGGCTGACA AGGCCAGGGA CACGATGTTG 
GTGCCGAAGA CGGCCCTGGA AACCCCTCCG CTAGAGATCC ATACCCTTGG TGCTGATGCG 
TTGCGTCAGC CTGCTCAGCG GATCGGCAAG GTGAACGATC AAGTGCGAGA ACTGGCCCGA 
GACATGCTGC GCAGCATGTA TACCGCCAAG GGCATCGGAT TGGCCGCTCC TCAAGTTGCT 
GTTTATCAGC AGCTTTTGGT GATTGATCTT GACCTGGAAA ACGCAGCGAC GCCCCCTCTG 
GTGCTGATTA ATCCAGAGAT CACGGCCGCA AGCGCTGGTT TGGACACCTA TGAGGAAGGC 
TGCCTCAGCA TCCCTGGGGT GTATCTCGAT GTGGTGCGTC CCACTGCCAT CGAATTGAGT 
TATCGCGATG AGATGGGTCG GCCACGAAAA ATGAAAGCCG ATGGATTAAT GGCCCGTTGT 
ATTCAGCATG AGATGGACCA TCTCAATGGT GTTTTATTTG TGGATCGGGT GACGGATCAA 
GCCGGCCTTC AGAAAGAATT AAAGGAAAAT GGGTTCCAGT CCAAGCATGT CCAAAGCGTG 
TCCTGA 

 

Protein sequence

MAGSFAQLAR AADKARDTML VPKTALETPP LEIHTLGADA LRQPAQRIGK VNDQVRELAR 
DMLRSMYTAK GIGLAAPQVA VYQQLLVIDL DLENAATPPL VLINPEITAA SAGLDTYEEG 
CLSIPGVYLD VVRPTAIELS YRDEMGRPRK MKADGLMARC IQHEMDHLNG VLFVDRVTDQ 
AGLQKELKEN GFQSKHVQSV S