| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0389 |
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| Symbol | |
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| ID | 3742825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 403855 |
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| End bp | 404997 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637770560 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_376403 |
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| Protein GI | 78183968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0233087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCATC CGCAGCGACT GATTTTTTCC ATCGCCGCTT TGATCACCGT GGGGGCTTGT
AAAGCCGAGG GCCCTGCAGC ACCACCCCCG CCGAAAGTGC AGGCTGTGTC AACGCGCATG
GCTGAGTTCA CCGAGGGCGT GGATACGGTG AGCACCCTGG AAGCCAGCAA TCTGGTGGAG
CTAGCAGCGC AGTCTGCTGG TCGGATTCTT GAATTGAAGA TTCGCCAGGG AGATGAGGTT
GAACCTGGTC AATTGTTGGT GGTTCTTGAT CAAGCTCAGC TTCAAGCCCA GCTGGCTGAG
GAGCGGGCGA AGGCTGAAAC AGCCAAGACC AACTGGGAGC GTTATGAGTA CCTCGCGCGG
GTCGGAGCGT CATCTCAAAA GCAGCTTGAT ACCTATCGGA CCCAGTATTT CTCAGCCATG
GAGCGGGTTA AGGCCACAGA AGCCAATGTC AGTTACAGCA ACCTCAAATC ACCGTCTGCA
GGAACTGTTG CAGACGTGAA AGCAAAAGTT GGTGATGTGC TGCAGCAGGG ACAAGTGTTC
ACCAGTTTGG TGCAAAACAA CGAGCTCGAA GCTCGTGTGG AAGTTCCAGC TGTATTCGCG
TCACGGTTGG CGTTGGGGCA GCCGGTTCTG CTGAGTGCAC CAGGAAAGGA TGCAGTCATT
GCGACCGGTC AAGTGCAATC CATTGACCCT CGGATTAATT CGCAGACGCA GGGGCTATTG
GTGAAAGCGG TTTTTGCTAA CACCGATGGC ACATTGCGCG ATGGTCAACG CTTGCGCACT
CGCGTACAAA TTGAGGCCAA ACAAGACTTG TCTGTTCCAT TTGCTGCTGT CACGCAAACC
TCTGGACAGA GTTTTGTGTT TCGACTTGGC AGCTTGGATG AGCTCAAGGC CAATCCTGGT
AAAGCTGATT TGGACGTTTT GGATAAGGCA ACGAAAGCAG GGAAACTTCC GCCAAATGCT
CAATTCGCAC TTCAAACCCC AGTGGTTGTT GGCGAACTGG AAAATGATCT TTATCCGATC
AATAAAGGTT TGAAACCCAA TCAGAAGGTG GTGACAACCA ATTTGCTCAA TCTGAAGCAC
GGAATGCCTG TTCAAGTGCA GCCTGCAGCC GGTGCATCCG CAACACCTTC CCAAGCAAAC
TGA
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| Protein sequence | MRHPQRLIFS IAALITVGAC KAEGPAAPPP PKVQAVSTRM AEFTEGVDTV STLEASNLVE
LAAQSAGRIL ELKIRQGDEV EPGQLLVVLD QAQLQAQLAE ERAKAETAKT NWERYEYLAR
VGASSQKQLD TYRTQYFSAM ERVKATEANV SYSNLKSPSA GTVADVKAKV GDVLQQGQVF
TSLVQNNELE ARVEVPAVFA SRLALGQPVL LSAPGKDAVI ATGQVQSIDP RINSQTQGLL
VKAVFANTDG TLRDGQRLRT RVQIEAKQDL SVPFAAVTQT SGQSFVFRLG SLDELKANPG
KADLDVLDKA TKAGKLPPNA QFALQTPVVV GELENDLYPI NKGLKPNQKV VTTNLLNLKH
GMPVQVQPAA GASATPSQAN
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