Gene Syncc9902_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0383 
Symbol 
ID3742819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp397342 
End bp398490 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID637770554 
Productputative NADH dehydrogenase, transport associated 
Protein accessionYP_376397 
Protein GI78183962 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAC CAACTTCTTC GGCGGATGCC GTGGTGATTG TCGGAGGCGG TTTTGGTGGA 
TGGTTTGCGG CTCTCGCAAT TCAAAAACGA CTGCCTCACT GCCGTGTGGT GCTAATCGAA
CCCCGCAGAG AGTTTCTGTT TCAACCATTG CTCTATGAAC TTCTCAGCCA TGAGCTGCAG
GAGTGGGAAG TAGCTCCGCA ATACAACGAA CTCGTGAGTC ACCACGGCAT TTGTTGGTTG
CAAGATGAGG TAATAAGCAT CGATCGTTCG AATCACTCCC TACAAACCCG TTCCGGGGAT
TGCATCCCGT GGAGGCAATT GGTGCTTGCA ACGGGATCAC AACCCAACGA TTTCGGCATT
CCCGGGGTGA AGGAACACAG CCGTGGATTC CGCAACCTCA GCGATGTGCG AGAGCTGCGT
CAACGCATCC AGGATTTGCT CCACCAGAGA CGGGCCAATG CAGCCCTCGC CATTGTTGGG
GCAGGCCCCA CGGGAGTGGA GCTGTCCTGC AAGCTGGCAG ACCTCCTGAA CGGCAGCGCC
AGAATTCATC TCATTGAAAA GGGAGACAGC ATCCTTCCGA ATAGCTCGGC TTTTAATCGA
GAACGCGCCA CTGCTGCCCT GGAGCGGAAA GACGTTTGCC TCCATCTGAA TGCAAATGTG
GCGAGGGTTG AAGCCGATCG AGTTGTGTTC GCCGAAGGAG AGGAGATTGA GCACCAGGGT
TTGATCTGGA CGGCAGGCAG TCAGGCCAAA GTGCCCTCTG TTCAGCCCCT CCCCCAATTG
CATCGAGGCC ACCTAGCCGT TCGCGCTGAT CTGCGACTCC AAGACAGTTT TGATGTTTTC
GCCATCGGTG ATACAGCCAT GAACGGCGAA GACCCAGCCC CAGCGAATGC CCAGGTCGCG
ATGCAGCAAG GGGAAGCCGT GGGTGATGCG ATTGCTGCTT TGCGAGCTGG CGAAGAGCCC
CAGACCTTTG AATTCAAGGA TCGAGGAGAA ATGCTCAGCC TCGGCATCGG AGATGCCACC
TTGACTGGGC TTGGAATCAC CCTTGCAGGC CCGCTCGCCT TTCAACTGCG CAGAGCGGCC
TATCTCACAC GCATGCCCGG CCTATCAGTT GGTGTTCGCT CCGCCGGTGC CTGGTTGCTG
AACCGTTGA
 
Protein sequence
MTSPTSSADA VVIVGGGFGG WFAALAIQKR LPHCRVVLIE PRREFLFQPL LYELLSHELQ 
EWEVAPQYNE LVSHHGICWL QDEVISIDRS NHSLQTRSGD CIPWRQLVLA TGSQPNDFGI
PGVKEHSRGF RNLSDVRELR QRIQDLLHQR RANAALAIVG AGPTGVELSC KLADLLNGSA
RIHLIEKGDS ILPNSSAFNR ERATAALERK DVCLHLNANV ARVEADRVVF AEGEEIEHQG
LIWTAGSQAK VPSVQPLPQL HRGHLAVRAD LRLQDSFDVF AIGDTAMNGE DPAPANAQVA
MQQGEAVGDA IAALRAGEEP QTFEFKDRGE MLSLGIGDAT LTGLGITLAG PLAFQLRRAA
YLTRMPGLSV GVRSAGAWLL NR