| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0354 |
|---|
| Symbol | |
|---|
| ID | 3743568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 363841 |
|---|
| End bp | 364770 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637770524 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_376370 |
|---|
| Protein GI | 78183935 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4243] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCA CCCGTCTCGT TAGTCGTCGT CGTCAAGACC CTGGAGCCAA GTGGGCGCGC
ATTGCGATGG CAGTGCTGGC CACGATCGGC GTCATTGATA CGGGGTCGAT CACGCTGAAG
CGTTGGGGAT TTCTTGGGGA TCTCACCTGC CCGATGGGTG CTGACGGGTG CGACAAGGTG
CTCAACAGTG CTTGGGGTTC GTTGGCTGAT GGCATTCCGC TCTCGTTAGT GGGTCTCGTG
GCCTATGGGG TTGTGGTGTT GATGGCCTTG GTGCCCTTGT TGCCAGGGCT GCAGGAAAAC
AAATCGGAGT TGTCGCGTCG CACTTGGTGG GGACTCTTCA TGGTCTCCAC AGGAATGGCG
GTGTTCAGCG GGGTTTTGTT GGGCCTGATG GTCTTCAAGA TTCAGGCATT TTGTTTTTTC
TGTGTTCTCT CAGCAGCGCT GTCCCTAATT CTTTTAGTGC TCTCGGTGGT TGGTGGTGGC
TGGGACGACC CTGGCACCCT GATTTTCCGG GGTGTGCTCT TGGCCCTTGC CGTGCTGTTA
GGGGGATTGA TTTGGGCGTC GGTGGTCGAT CCAGACCGTC CTGAATCCGT TGAAACGGGT
GCCGGCATCG CCCCAGTGGT GACGCAGGAG AGTTCTCCTG CGTCAGTCGC ATTGGCGGAC
CATCTCACCG CTGGAGGTGC CGTGATGTAC TCCGCCTACT GGTGTCCTCA CTGCCATGAC
CAGAAAGAGA TGTTTGGGAA GGAGGCAAGT CAGCAGTTGC AGGTTGTGGA GTGTGCTGCT
GATGGCCAGA ACAATCAGGC TGATTTATGT CGCAGCAAGG GGTTGGAGGG TTTCCCAAGC
TGGGAAATCA ATGGAGAGAT TGATTCTGGT GTGAAATCGC TCGACAGCCT CGCCGACCTA
AGTGGCTACA AGGGAGATCG CGACTTTTGA
|
|---|
| Protein sequence | MGSTRLVSRR RQDPGAKWAR IAMAVLATIG VIDTGSITLK RWGFLGDLTC PMGADGCDKV
LNSAWGSLAD GIPLSLVGLV AYGVVVLMAL VPLLPGLQEN KSELSRRTWW GLFMVSTGMA
VFSGVLLGLM VFKIQAFCFF CVLSAALSLI LLVLSVVGGG WDDPGTLIFR GVLLALAVLL
GGLIWASVVD PDRPESVETG AGIAPVVTQE SSPASVALAD HLTAGGAVMY SAYWCPHCHD
QKEMFGKEAS QQLQVVECAA DGQNNQADLC RSKGLEGFPS WEINGEIDSG VKSLDSLADL
SGYKGDRDF
|
|---|
| |