Gene Syncc9902_0348 details

Gene Information

• Locus tag: Syncc9902_0348
• ID: 3743562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 357980
• End bp: 358678
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637770517
• Product: putative riboflavin-specific deaminase
• Protein accession: YP_376364
• Protein GI: 78183929
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1985] Pyrimidine reductase, riboflavin biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTTGC AGCCATCTGA CGACTGCGCT GCTCCAGCGC TCGAGCGGCC TGAAACACGG 
CTTGTTTTGG CTATTTCGCT AGACGGTCGT TTGGCGCCTG CTGAGGGTGG TGCAGCCCAA 
TTGGGAGGGA AGGGAGATCG TCGTGTTCTT GACACAGCAC TGGCCTGGGC TGACGCCTGT 
TTGATGGGTG CAGGGACGTT ACGGGCCCAC CAAAGCACTT GTTTAATCCG GGATCGGGCC 
TTGCTTCAAC AACGCGTCGA TCAAGGTCGA TCCGCCCAGC CCACGGCGGT GGTGGTGAGT 
CGATCTGATG CGTTCCCCCT GCAGTGGCAA TTTTTTCGGC AGCCTTTGGA GCGATGGTTG 
TTGGCACCGA AAGCTCCCGC TGAAGGTTTT GATCGCTGGA TTCCGTTAGG CCACTCTTGG 
CCCGAGCGCC TTGAAGCTCT GTATGCCTGT GGGGTGCGAC GCCTCGCGCT GTTGGGGGGT 
GCGTCTTTGG CGGCGGAAGT GCTGCAAGCT GATTGCGTAG ATGCCCTTCA GCTCACACTG 
GTGCCGACAT TGCTTGGCGG GCCACACACA TGGCTGCCTG TTGATGCGAA ACCACTCCCA 
CTTTCAATGC TGGGAGCTGG GGCCTGGAGC TGCGATGGGC TCGAAGACTT GGGTGAGGGT 
GAAATGGTGC TCCGCTACCG AAGGCAACGA GTGCATTAG 

 

Protein sequence

MPLQPSDDCA APALERPETR LVLAISLDGR LAPAEGGAAQ LGGKGDRRVL DTALAWADAC 
LMGAGTLRAH QSTCLIRDRA LLQQRVDQGR SAQPTAVVVS RSDAFPLQWQ FFRQPLERWL 
LAPKAPAEGF DRWIPLGHSW PERLEALYAC GVRRLALLGG ASLAAEVLQA DCVDALQLTL 
VPTLLGGPHT WLPVDAKPLP LSMLGAGAWS CDGLEDLGEG EMVLRYRRQR VH