Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0339 |
Symbol | |
ID | 3744152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 351302 |
End bp | 352504 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770507 |
Product | TPR repeat-containing protein |
Protein accession | YP_376355 |
Protein GI | 78183920 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.698701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGCC TTTCCATGAT CGTGCGCAAC GAGGAGGCAC GACTGGCAAC CTGCTTGGCC TCCGTGAAGG GGTTCGCCGA TGAAATGGTC GTGGTGGACA CCGGTTCTAT TGATGGCACG GTGGCGATCG CCGAACAAGC TGGGGCCCGC GTCGAGCAGA TGGAATGGCC TGGGGATTTT GCCCCTGCCC GAAACCATGC CCTGAAATTC CTCACGGGCG ATTGGGTGCT GGTGCTGGAT GCGGATGAAC AACTTCGGCC TGAAGTGGTT CCGTCTTTAA AAGCCCTGAT GGCCCAGCCC GATGTATTGG TTATCAACCT GCTTCGCTAT GAGATCGGGG CGGCCATGGC TCCTTACTCC AGCGTCAGTC GGTTGTTTCG ACGTCATCCC AGCATCCAGT GGAGTCGCCC TTATCACTCG ATGATCGATG AGAGCGTTCA GGCGCTCATC ACGTCTGAGC CTCAGTGGCG TATCGCGAAT TGCAGCGAAC CCGCCATCCT TCATGACGGT TACAGACCCG AACTTCTCTC TGGCTCCGAC AAAGCCGATC GGCTGCGTGA AGCGATGGAG GACGACCTCA AACGACACCC TGGGGATCCC TACGCAAGCG CCAAGCTCGG GGGACTCTTG ATCAGCGAAG GCCGCGCGTC TGAGGCCATC CCGCTGTTGC GACAAGGCCT TGAAGGTGCA ACCGCCCAGA GCAGCGAGCG TTACGAACTG CTCTTGCATC TCGGTTTAGC GCTCAACGAA TCCGACCCAG ACGAAGCCGT TGCCTTCTAT CGCCAAGCCC TAGATATCCC GCTTGATACC CGCATCACCC TTGGTGCTCG CCTCAACCTG GCAGCCCGAT TGATGGAACA AGACCAACTC GATGAGGCGA TCCAACTCAC GCAAACCGCC ACGCAACGGG CACCGGAAGT GGCCTTGGGT TGGTACAACC TCGGCTTAAT GCTCCGCAAA AAAGGCGAGA TCGCCTCGGC CCTCGAGGCC TATGGCCGTT CCCTTGCCTT GGATCCCAAC AACGCCGCAT GCCATCAAAA CCATGCCGTG GCCAGGTTGC TCGGCGGTGA TATCGAAGCC GCCCGCAACG GTTTTCGCAA AGCGATAGAA CTCCTAGCGG CCCAAGGTCG CAGCGAGGAG GCCCGCCAAC TGCGCGACAA CGTTCAAGGA ATCGTGAAAC TTGATGCGGA GCTGGTGATG TGA
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Protein sequence | MLSLSMIVRN EEARLATCLA SVKGFADEMV VVDTGSIDGT VAIAEQAGAR VEQMEWPGDF APARNHALKF LTGDWVLVLD ADEQLRPEVV PSLKALMAQP DVLVINLLRY EIGAAMAPYS SVSRLFRRHP SIQWSRPYHS MIDESVQALI TSEPQWRIAN CSEPAILHDG YRPELLSGSD KADRLREAME DDLKRHPGDP YASAKLGGLL ISEGRASEAI PLLRQGLEGA TAQSSERYEL LLHLGLALNE SDPDEAVAFY RQALDIPLDT RITLGARLNL AARLMEQDQL DEAIQLTQTA TQRAPEVALG WYNLGLMLRK KGEIASALEA YGRSLALDPN NAACHQNHAV ARLLGGDIEA ARNGFRKAIE LLAAQGRSEE ARQLRDNVQG IVKLDAELVM
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