| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0317 |
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| Symbol | |
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| ID | 3743551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 327793 |
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| End bp | 328848 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637770485 |
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| Product | photosystem II reaction centre protein PsbD/D2 |
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| Protein accession | YP_376333 |
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| Protein GI | 78183898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B))
[TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.404544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTG CTGTAGGACG CGCGCCTCAG CGGGGATGGT TTGACGTCCT CGATGACTGG
CTCAAGCGCG ACCGCTTCGT ATTCATCGGC TGGTCTGGCC TACTTCTGCT CCCGACGGCC
TACATGGCTA TCGGTGGCTG GCTGACCGGC ACCACATTTG TCACCTCCTG GTACACCCAC
GGCATCGCGT CGTCGTACCT CGAAGGTTGC AACTTCCTCA CCGCTGCTGT TTCGACCCCC
GCTGACGCGA TGGGTCACAG CTTGCTGCTG CTCTGGGGCC CAGAAGCCCA GGGCGATTTT
GTCCGCTGGT GTCAACTCGG CGGCCTCTGG GCTTTTGTTG CCCTGCACGG TGCTTTCGCA
CTGATCGGCT TCATGCTGCG TCAGTTCGAA ATTGCTCGTC TCGTCGGCAT TCGTCCCTAC
AACGCCATTG CCTTCTCCGG CCCGATTGCG GTGTTCGTCA GTGTTTTCCT GATGTACCCC
CTCGGCCAGA GCAGCTGGTT CTTCGCGCCA TCCTTCGGTG TGGCAGCGAT CTTCCGCTTC
CTCCTCTTCT TGCAGGGCTT CCACAACTGG ACGCTGAACC CCTTCCACAT GATGGGAGTG
GCCGGCATCT TGGGCGGCGC TCTGTTGTGT GCCATTCACG GTGCAACCGT GGAAAACACA
CTGTTCGAGG ATGGTGAGCA AGCGAACACC TTTAAGGCGT TCGAACCCAC CCAGGAAGAA
GAGACCTATT CCATGGTCAC CGCCAACCGC TTCTGGAGCC AAATCTTCGG AATTGCGTTC
TCCAACAAGC GCTGGCTGCA CTTCTTCATG CTGTTCGTGC CAGTGATGGG CCTCTGGACT
AGCTCCATCG GCATCATCGG TCTGGCCCTC AACCTGCGCG CCTATGACTT CGTGTCACAG
GAAATCCGCG CTGCTGAGGA CCCCGAATTT GAGACCTTCT ACACCAAGAA CATTCTTCTG
AATGAAGGTC TGCGTGCCTG GATGGCACCG GCTGACCAGC CGCATGAAAA CTTCGTCTTC
CCTGAAGAGG TTCTGCCCCG CGGTAACGCT CTCTAA
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| Protein sequence | MTIAVGRAPQ RGWFDVLDDW LKRDRFVFIG WSGLLLLPTA YMAIGGWLTG TTFVTSWYTH
GIASSYLEGC NFLTAAVSTP ADAMGHSLLL LWGPEAQGDF VRWCQLGGLW AFVALHGAFA
LIGFMLRQFE IARLVGIRPY NAIAFSGPIA VFVSVFLMYP LGQSSWFFAP SFGVAAIFRF
LLFLQGFHNW TLNPFHMMGV AGILGGALLC AIHGATVENT LFEDGEQANT FKAFEPTQEE
ETYSMVTANR FWSQIFGIAF SNKRWLHFFM LFVPVMGLWT SSIGIIGLAL NLRAYDFVSQ
EIRAAEDPEF ETFYTKNILL NEGLRAWMAP ADQPHENFVF PEEVLPRGNA L
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