Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0311 |
Symbol | |
ID | 3743546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 321632 |
End bp | 323935 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637770479 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_376327 |
Protein GI | 78183893 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGACCG TCGTCCTGGA TGTGGAAGGG ATGAAGTGTG GCGGTTGCGT GTCCGCGGTG GAACGCACGT TGCTTGAGCA GCCGGGTGTG CAGCGGGCTG ATGTGAATTT GGTGAGTCGT GCAGCTTGGC TGGATTTGGC TGAGTCCGAC GGCAATGTCG ACGAGGTGCT GGCGGCTTTG GCGGCGCGGG GATTCCCAGC CCGTGAGCGT TCCTTGGAGT TTCAGCCGGG TCTTAAGGGG GCGACTGGAT CCACCGGTCT GAGTTGGTGG CGTCAGTGGC GTCAGTTGAT GGTGGCGCTG GTGCTGTTGC TGCTGTCGGT GATGGGACAC CTCAGCGAAG CCGGGCAATT GTCAGTGCCG GTGATTGGAA GCCTCCCGTT CCACGCGGGA TTGGCGACCG TCGCCTTGTT TGGTCCAGGT CGCCAGATCC TGTCTGGGGG CATAAAAGCA GCCCGTGTTG GTGCCCCGAG CATGGACACC TTGGTGGGGC TGGGGGTGGG CAGCGCCTAT CTGGCGAGCT TGGCGGCCTT GGTGTGGCCC ACGGTGGGTT GGCCGTGCTT TTTCAACGAG CCGGTGATGT TGCTGGGATT TGTGCTTTTG GGGCGCTTCC TCGAAGAACG GGCTCGTTTC CGAACGGGGC AGGCCCTCCA GCAACTAGCT CAATTGCAGC CTGAGACGGC TCGTTTGGTG TTAACGGATG GTGAGATTCG TGAGGTCAGA GTTGGAGCTC TGCGGCCAGG TGAACGCGTC CAACTTCTGG CCGGGGATCG CATTCCTGTT GATGGAGTTG TTCGTGAGGG GCTTTCGGCG GTGGATGTCT CGAGCCTCAC CGGAGAACCA ATGCCTCTCC AAGTGGAGCC TGGTACTGAG CTGTCGTCCG GCAGTTTGAA TTTGGAAGCG CCGCTCGTTC TTGAAGTGAG CCGGGTGGGT TCCGACACTG CTCTTGCTCG CATTATTCGG CTGGTTGAGC AGGCCCAGGC ACGCCGAGCC CCCATTCAAG GGTTGGCGGA TCGGGTGGCA GGACGGTTTT GCTACGGCGT GATGGCCTTG GCCCTAGCCA CCTTTTTGTT TTGGTGGCTC TTTGGTGCGT CCCATTGGCC CGAGGTGTTG CAGGCCAATG CTCCTGGTCT GCCCCATGCC CATGGCATGG TTCATGGCGC TCAGACCCAT CACAGTGGAT TGGGCAGTGG TGCCACCACG CCGATCGGCT TAGCGCTCCA GCTCACCATT GCCGTGCTTG TGGTGGCCTG CCCCTGCGCT TTGGGCTTGG CAACTCCCAC GGTGATTACC GTCTCCACCG GTTTAGCGGC GAGACGCGGT TGGTTGTTTC GAGGTGGTGA TGTGATCGAA ACCGCAGCTG CTCTAGATCA GGTGGTCTTC GACAAGACCG GCACGCTCAC ATTGGGGCGG CCGCTGGTCA CCGACGTTTT TGGTGAAGAT CCCAATCTTT TGTTGCAGTG GGCAGCGAGC CTGGAGCAGA GCAGCCGCCA TCCGCTGGCC TATGCCCTGC TGCAAGAGGC GCAACGGCGC GACTTGGCCT TGATCGATGT AACCCGTGTA TCCACTGTGT CTGGGGAAGG ACTTTGGGGT GAGCTGGACG GGGTGGTCGG TGACCTTCGG GTTGGAAAGC CCGCTTGGCT GCAAAGTTTC GGTGTCGACT TCTCCGCTGG AGCAACGGCC TGGTTGGCCG CGGCTCAGGG ATCGGTGGTT GCGGTCTCGG CTGGACAGGT ATTGGTTGGA TTACTGCAAG TTGAAGACAA GCAACGGCCT GATGTCGCCC CTTCATTGGA GAGGCTCCGC GCCTCCGGTC TCAAGCTCGC CATCTTCAGT GGTGACCGTG AAGTGGCAGT ACGTCGCCTC GGGGAGAGGC TGGGCTTCGC CGAAGCTGAC CTCGGTTGGC AGATGCTTCC TCAACAGAAA CTCGAGCGAT TGGAGCAGCT CCGTCAAGAA GGGCGGGTGG CGATGGTGGG TGATGGCATC AATGACGCAC CTGCTTTGGC CGCGGCTGAT TTGGGCATTG CCATCGGTAC AGGTACCCAG ATTGCGCAGG ACACCGCCGA TATGGTCTTG CTCGGCGATC GTTTGGACAA CCTTCCCGAA GCGCTTTCAT TGGCTCGGCG CACTCTGAAT AAAGTCCGCC AGAACCTTTT TTGGGCTTTT GGGTACAACC TGATTGCTCT TCCGGTCGCG GCCGGTGTTT TGCTGCCGAG TCAAGGCGTG TTGCTCTCAC CGCCTTTCGC GGCCCTGTTG ATGGCTCTGA GCTCGATCAC AGTGGTTGTG AATGCTTTGG CTTTACGGAT ATGA
|
Protein sequence | MQTVVLDVEG MKCGGCVSAV ERTLLEQPGV QRADVNLVSR AAWLDLAESD GNVDEVLAAL AARGFPARER SLEFQPGLKG ATGSTGLSWW RQWRQLMVAL VLLLLSVMGH LSEAGQLSVP VIGSLPFHAG LATVALFGPG RQILSGGIKA ARVGAPSMDT LVGLGVGSAY LASLAALVWP TVGWPCFFNE PVMLLGFVLL GRFLEERARF RTGQALQQLA QLQPETARLV LTDGEIREVR VGALRPGERV QLLAGDRIPV DGVVREGLSA VDVSSLTGEP MPLQVEPGTE LSSGSLNLEA PLVLEVSRVG SDTALARIIR LVEQAQARRA PIQGLADRVA GRFCYGVMAL ALATFLFWWL FGASHWPEVL QANAPGLPHA HGMVHGAQTH HSGLGSGATT PIGLALQLTI AVLVVACPCA LGLATPTVIT VSTGLAARRG WLFRGGDVIE TAAALDQVVF DKTGTLTLGR PLVTDVFGED PNLLLQWAAS LEQSSRHPLA YALLQEAQRR DLALIDVTRV STVSGEGLWG ELDGVVGDLR VGKPAWLQSF GVDFSAGATA WLAAAQGSVV AVSAGQVLVG LLQVEDKQRP DVAPSLERLR ASGLKLAIFS GDREVAVRRL GERLGFAEAD LGWQMLPQQK LERLEQLRQE GRVAMVGDGI NDAPALAAAD LGIAIGTGTQ IAQDTADMVL LGDRLDNLPE ALSLARRTLN KVRQNLFWAF GYNLIALPVA AGVLLPSQGV LLSPPFAALL MALSSITVVV NALALRI
|
| |