Gene Syncc9902_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0311 
Symbol 
ID3743546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp321632 
End bp323935 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content60% 
IMG OID637770479 
Productcopper-translocating P-type ATPase 
Protein accessionYP_376327 
Protein GI78183893 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCG TCGTCCTGGA TGTGGAAGGG ATGAAGTGTG GCGGTTGCGT GTCCGCGGTG 
GAACGCACGT TGCTTGAGCA GCCGGGTGTG CAGCGGGCTG ATGTGAATTT GGTGAGTCGT
GCAGCTTGGC TGGATTTGGC TGAGTCCGAC GGCAATGTCG ACGAGGTGCT GGCGGCTTTG
GCGGCGCGGG GATTCCCAGC CCGTGAGCGT TCCTTGGAGT TTCAGCCGGG TCTTAAGGGG
GCGACTGGAT CCACCGGTCT GAGTTGGTGG CGTCAGTGGC GTCAGTTGAT GGTGGCGCTG
GTGCTGTTGC TGCTGTCGGT GATGGGACAC CTCAGCGAAG CCGGGCAATT GTCAGTGCCG
GTGATTGGAA GCCTCCCGTT CCACGCGGGA TTGGCGACCG TCGCCTTGTT TGGTCCAGGT
CGCCAGATCC TGTCTGGGGG CATAAAAGCA GCCCGTGTTG GTGCCCCGAG CATGGACACC
TTGGTGGGGC TGGGGGTGGG CAGCGCCTAT CTGGCGAGCT TGGCGGCCTT GGTGTGGCCC
ACGGTGGGTT GGCCGTGCTT TTTCAACGAG CCGGTGATGT TGCTGGGATT TGTGCTTTTG
GGGCGCTTCC TCGAAGAACG GGCTCGTTTC CGAACGGGGC AGGCCCTCCA GCAACTAGCT
CAATTGCAGC CTGAGACGGC TCGTTTGGTG TTAACGGATG GTGAGATTCG TGAGGTCAGA
GTTGGAGCTC TGCGGCCAGG TGAACGCGTC CAACTTCTGG CCGGGGATCG CATTCCTGTT
GATGGAGTTG TTCGTGAGGG GCTTTCGGCG GTGGATGTCT CGAGCCTCAC CGGAGAACCA
ATGCCTCTCC AAGTGGAGCC TGGTACTGAG CTGTCGTCCG GCAGTTTGAA TTTGGAAGCG
CCGCTCGTTC TTGAAGTGAG CCGGGTGGGT TCCGACACTG CTCTTGCTCG CATTATTCGG
CTGGTTGAGC AGGCCCAGGC ACGCCGAGCC CCCATTCAAG GGTTGGCGGA TCGGGTGGCA
GGACGGTTTT GCTACGGCGT GATGGCCTTG GCCCTAGCCA CCTTTTTGTT TTGGTGGCTC
TTTGGTGCGT CCCATTGGCC CGAGGTGTTG CAGGCCAATG CTCCTGGTCT GCCCCATGCC
CATGGCATGG TTCATGGCGC TCAGACCCAT CACAGTGGAT TGGGCAGTGG TGCCACCACG
CCGATCGGCT TAGCGCTCCA GCTCACCATT GCCGTGCTTG TGGTGGCCTG CCCCTGCGCT
TTGGGCTTGG CAACTCCCAC GGTGATTACC GTCTCCACCG GTTTAGCGGC GAGACGCGGT
TGGTTGTTTC GAGGTGGTGA TGTGATCGAA ACCGCAGCTG CTCTAGATCA GGTGGTCTTC
GACAAGACCG GCACGCTCAC ATTGGGGCGG CCGCTGGTCA CCGACGTTTT TGGTGAAGAT
CCCAATCTTT TGTTGCAGTG GGCAGCGAGC CTGGAGCAGA GCAGCCGCCA TCCGCTGGCC
TATGCCCTGC TGCAAGAGGC GCAACGGCGC GACTTGGCCT TGATCGATGT AACCCGTGTA
TCCACTGTGT CTGGGGAAGG ACTTTGGGGT GAGCTGGACG GGGTGGTCGG TGACCTTCGG
GTTGGAAAGC CCGCTTGGCT GCAAAGTTTC GGTGTCGACT TCTCCGCTGG AGCAACGGCC
TGGTTGGCCG CGGCTCAGGG ATCGGTGGTT GCGGTCTCGG CTGGACAGGT ATTGGTTGGA
TTACTGCAAG TTGAAGACAA GCAACGGCCT GATGTCGCCC CTTCATTGGA GAGGCTCCGC
GCCTCCGGTC TCAAGCTCGC CATCTTCAGT GGTGACCGTG AAGTGGCAGT ACGTCGCCTC
GGGGAGAGGC TGGGCTTCGC CGAAGCTGAC CTCGGTTGGC AGATGCTTCC TCAACAGAAA
CTCGAGCGAT TGGAGCAGCT CCGTCAAGAA GGGCGGGTGG CGATGGTGGG TGATGGCATC
AATGACGCAC CTGCTTTGGC CGCGGCTGAT TTGGGCATTG CCATCGGTAC AGGTACCCAG
ATTGCGCAGG ACACCGCCGA TATGGTCTTG CTCGGCGATC GTTTGGACAA CCTTCCCGAA
GCGCTTTCAT TGGCTCGGCG CACTCTGAAT AAAGTCCGCC AGAACCTTTT TTGGGCTTTT
GGGTACAACC TGATTGCTCT TCCGGTCGCG GCCGGTGTTT TGCTGCCGAG TCAAGGCGTG
TTGCTCTCAC CGCCTTTCGC GGCCCTGTTG ATGGCTCTGA GCTCGATCAC AGTGGTTGTG
AATGCTTTGG CTTTACGGAT ATGA
 
Protein sequence
MQTVVLDVEG MKCGGCVSAV ERTLLEQPGV QRADVNLVSR AAWLDLAESD GNVDEVLAAL 
AARGFPARER SLEFQPGLKG ATGSTGLSWW RQWRQLMVAL VLLLLSVMGH LSEAGQLSVP
VIGSLPFHAG LATVALFGPG RQILSGGIKA ARVGAPSMDT LVGLGVGSAY LASLAALVWP
TVGWPCFFNE PVMLLGFVLL GRFLEERARF RTGQALQQLA QLQPETARLV LTDGEIREVR
VGALRPGERV QLLAGDRIPV DGVVREGLSA VDVSSLTGEP MPLQVEPGTE LSSGSLNLEA
PLVLEVSRVG SDTALARIIR LVEQAQARRA PIQGLADRVA GRFCYGVMAL ALATFLFWWL
FGASHWPEVL QANAPGLPHA HGMVHGAQTH HSGLGSGATT PIGLALQLTI AVLVVACPCA
LGLATPTVIT VSTGLAARRG WLFRGGDVIE TAAALDQVVF DKTGTLTLGR PLVTDVFGED
PNLLLQWAAS LEQSSRHPLA YALLQEAQRR DLALIDVTRV STVSGEGLWG ELDGVVGDLR
VGKPAWLQSF GVDFSAGATA WLAAAQGSVV AVSAGQVLVG LLQVEDKQRP DVAPSLERLR
ASGLKLAIFS GDREVAVRRL GERLGFAEAD LGWQMLPQQK LERLEQLRQE GRVAMVGDGI
NDAPALAAAD LGIAIGTGTQ IAQDTADMVL LGDRLDNLPE ALSLARRTLN KVRQNLFWAF
GYNLIALPVA AGVLLPSQGV LLSPPFAALL MALSSITVVV NALALRI