Gene Syncc9902_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0289 
Symbol 
ID3742786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp300057 
End bp301235 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content50% 
IMG OID637770456 
Productputative sugar-phosphate nucleotidyl transferase 
Protein accessionYP_376305 
Protein GI78183871 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGA TGATTCTGGC GGCTGGCAAG GGGACAAGGG TGCAGCCGAT CACACATGTG 
ATCCCCAAGC CGATGATTCC AATCCTGCAA AAGCCAGTGA TGGAATTCCT GCTGGAACTT
TTGAAGGAGC ACGGTTTCAC CGAAGTGATG GTGAACGTGT CGCACCTAGC AGAAGAAATT
GAAAACTATT TCCGAGATGG TCAACGTTTT GGCGTTGAAC TGGCCTACAG CTTCGAAGGA
CGCATTGAAG ATGGAGAACT CATTGGCAGT GCGATGGGTT CTGCCGGTGG CCTGAAGAAA
ATCCAAGATT TTCAACATTT TTTTGATGAC ACCTTTGTTG TGCTCTGCGG TGATGCACTG
ATCGACCTCG ATCTCACCGA AGCGCTGAAG CGGCACCGAG AAAAAGGGGC CATCGCCAGC
TTGGTCACCA AACGCGTTCC CAAAGATCAG GTGAGCAGCT ACGGCGTTGT CGTGACTGAT
GACGAAGGTC GGATTTCCTC GTTCCAAGAA AAGCCCAGTA TCGATGAGGC CCTGAGCGAC
ACGATTAATA CTGGCATTTA CATTTTTGAG CCTGAAATAT TTGACCACAT CCCTTCAGGA
GTGTCCTTCG ATATCGGCTC AGATTTGTTT CCAAAGCTGG CGGCCTCTGG AGCTCCCTTC
TATGCCATAC CAATGGATTT TGAGTGGGTT GATATTGGCA AAGTTCCCGA CTATTGGCAG
GCCATTCGTA GCGTTTTATC TGGTGATGTT CGCCAAGTGG GTATTCCTGG CAAAGAGATC
CGTCCAGGCG TCTACACCGG CCTGAACGTG GCCGCTAATT GGGACAAAAT CAATGTGACT
GGGCCCGTAT ATGTCGGAGG GATGACCAAA ATCGAAGACG GTGCAACGAT TATTGGTCCC
ACAATGATTG GGCCTAGTTG TCATATTTGC GAAGGAGCCA CGGTTGATAA TTCGATTATT
TTCGACTACT CCCGAATTGG AGCGGGCGTT CAACTTGTTG AAAAACTTGT GTTTGGCCGT
TATTGCGTTG GCAAAGATGG CGACCACTTC GATCTTCAAG AAGCCTCCCT GGATTGGTTG
ATCACCGATG CACGACGCCA AGACCTTGTG GAACCATCAC CTCAACAAAA AGCGATGGCC
GAGCTGCTTG GCACAGATCT CATGTCGTCG GTGAACTGA
 
Protein sequence
MKAMILAAGK GTRVQPITHV IPKPMIPILQ KPVMEFLLEL LKEHGFTEVM VNVSHLAEEI 
ENYFRDGQRF GVELAYSFEG RIEDGELIGS AMGSAGGLKK IQDFQHFFDD TFVVLCGDAL
IDLDLTEALK RHREKGAIAS LVTKRVPKDQ VSSYGVVVTD DEGRISSFQE KPSIDEALSD
TINTGIYIFE PEIFDHIPSG VSFDIGSDLF PKLAASGAPF YAIPMDFEWV DIGKVPDYWQ
AIRSVLSGDV RQVGIPGKEI RPGVYTGLNV AANWDKINVT GPVYVGGMTK IEDGATIIGP
TMIGPSCHIC EGATVDNSII FDYSRIGAGV QLVEKLVFGR YCVGKDGDHF DLQEASLDWL
ITDARRQDLV EPSPQQKAMA ELLGTDLMSS VN