Gene Syncc9902_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0279 
Symbol 
ID3742324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp293159 
End bp294349 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content55% 
IMG OID637770446 
Productcitrate synthase 
Protein accessionYP_376295 
Protein GI78183861 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCAGC AGCAAGGTGG CGACCTTCGT CATGCGCGGA CTGGAATCGA ATTGAGGCCT 
GGTTTGGATG GCGTGCCCGC CACCAAGTCT GCGATTTGCG ATATCGATGG TGATCAGGGG
CTTCTCACCT ACCGCGGCTA TCCGATGGAG GATTTGGCCG TTAACAGCAG TTTTTTAGAG
ACGGCGTACT TACTCATTTG GGGTGAGTTG CCCACCGATG ACCAGCTTCA AGCCTTTGAG
CATGAAGTTC AAATGCATCG AAGAGTGAGC TTCCGGGTGC GAGACATGAT GAAGTGCTTC
CCGGCCAGTG GTCATCCCAT GGATGCCTTG CAGTCCAGTG CTGCATCCCT GGGGCTGTTT
TATTCCAGGC GGGCCATCGA TGACCCCGGA TACATCTACA AAGCTGTTGT TCGGTTAATC
GCCAAAATCC CGACGATGGT GGCGGCGTTT CAGTTGATTC GCAAGGGTCA GGATCCGATT
CAGCCTCGCG ATGATTTGGC CTATTCGGCC AATTTTCTCT ACATGCTCAC CGAGCGTGAG
CCTGACCCTC GCGCGGCACG GATTTTTGAT CGGTGCTTGA TGCTCCATGC GGAGCACAGC
TTGAATGCCA GCACGTTTAG TGCTCGGGTG ACTGCCAGTA CCCTCACTGA TCCTTATGCG
GTGATTGCAT CTGCCGTTGG CACCTTGGCG GGTCCATTGC ACGGTGGAGC GAATGAGGAT
GTGTTGGCCA TGCTCGAGGA GGTGGGCTCC CCCGCGCAGG CTGGCGCTTT CCTTGATGAG
GCAATTGCTG CCAAGCGCAA GATCATGGGC TTTGGTCACC GCGAATACAA GGTGAAAGAT
CCTCGGGCGG TGATCCTTCA GTCGCTTGTG GAGGAAATGT TTAACGACTT CGGCCACGAC
GACTTGTACG ACGTTGCACG AGCGATTGAA CATGAAGCGA TGGCTCGCCT GGGGCCTAAG
GGCATTTACC CAAATGTGGA TTTCTATTCC GGTTTGGTGT ACCGAAAACT CGGTATTCCG
CGCGATCTAT TCACGCCCGT GTTTGCGATC GCTCGTGTGG CTGGTTGGCT TGCTCATTGG
CGAGAACAAC TGGGAGCGAA CCGCATATTT CGCCCATCAC AGATCTATTC AGGAGCTCAA
CCGCGTCGTT GGACTCCGAT GGAGAAGCGA GCTGTGTCTA CGGCCGATTA A
 
Protein sequence
MAQQQGGDLR HARTGIELRP GLDGVPATKS AICDIDGDQG LLTYRGYPME DLAVNSSFLE 
TAYLLIWGEL PTDDQLQAFE HEVQMHRRVS FRVRDMMKCF PASGHPMDAL QSSAASLGLF
YSRRAIDDPG YIYKAVVRLI AKIPTMVAAF QLIRKGQDPI QPRDDLAYSA NFLYMLTERE
PDPRAARIFD RCLMLHAEHS LNASTFSARV TASTLTDPYA VIASAVGTLA GPLHGGANED
VLAMLEEVGS PAQAGAFLDE AIAAKRKIMG FGHREYKVKD PRAVILQSLV EEMFNDFGHD
DLYDVARAIE HEAMARLGPK GIYPNVDFYS GLVYRKLGIP RDLFTPVFAI ARVAGWLAHW
REQLGANRIF RPSQIYSGAQ PRRWTPMEKR AVSTAD