Gene Syncc9902_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0267 
Symboltgt 
ID3742312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp280458 
End bp281576 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content60% 
IMG OID637770434 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_376283 
Protein GI78183849 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCAACT TCGAGATCAG CGCCCATTGC CCCCACACGA AGGGGCGATG TGGCTGCTTC 
CACACCCCGC ATGGCCCGGT GCAGACCCCG CGGTTCATGC CTGTGGGCAC CCTGGCCACA
GTGAAAGGGA TCAGCACAGA GCAACTGGCC CGCACGGGAG CCCAGATGGT GCTGTCAAAC
ACATATCACC TGCATCTTCA ACCCGGCGAA CAAGTCGTCG CAGAGGCTGG AGGCCTTCAC
CGGTTTATGG GGTGGGATGG ACCCATGCTC ACCGATTCAG GGGGATTCCA AGTTTTCAGC
CTCGGGAATC TGAACAAGAT TGATGAACGA GGGGTGGTGT TTCGCAACCC GCGAGATGGG
CGCACTATCG ACATGACGCC AGAGCATGCC ACCAACATTC AAATGGCCCT TGGCGCTGAT
GTGGCGATGG CCTTTGACCA ATGTCCGCCC TACCCAGCAA CAGAAAACGA TGTGAAAGAT
GCCTGTCGAC GCACCCACGC CTGGCTTGAA CGCTGCGTCA ATGCCCATAC CCGATCCGAC
CAAGCCCTGT TCGGCATCGT TCAAGGTGGC TGCTTCCCCC ACCTCCGTCG CGAAAGCGCT
CGAGCCGTCG CCGCCTTCGA CCTTCCTGGC ATCGCCATCG GCGGCGTCAG CGTGGGCGAA
CCGACGGACG ACATGCATCG AATCGTGCGC GACATCGGTC CGCTCTTACC GCTGGATCGA
CCCCGTTACC TCATGGGGAT TGGCACGTTG CGTGAGATGG CCGTTGCCGT CGCCAACGGC
ATCGATTTAT TCGATTGCGT ACTCCCCACT CGCCTGGGCC GCCATGGCAC AGCACTGGTG
GGTGGAGAAC GCTGGAACCT CCGCAATGCC CGCTTCAGGA ATGACCACAC GCCCCTTGAT
TCCAGCTGTT CGTGTTTGGC CTGTACGGGC CATAGCCGCG CTTACATCCA CCATCTAATT
CGCAGCGACG AGCTCCTGGG ACTCACACTG CTGAGCCTGC ACAACATCAC GCATCTGGTG
CGATTCACCA ATGCCATGGC TCAAGCCATC CAAGACGGCT GTTTTTCAGA GGATTTCGCT
CCCTGGCAAG AGGACTCACC AGCCCATCAC ACGTGGTAG
 
Protein sequence
MFNFEISAHC PHTKGRCGCF HTPHGPVQTP RFMPVGTLAT VKGISTEQLA RTGAQMVLSN 
TYHLHLQPGE QVVAEAGGLH RFMGWDGPML TDSGGFQVFS LGNLNKIDER GVVFRNPRDG
RTIDMTPEHA TNIQMALGAD VAMAFDQCPP YPATENDVKD ACRRTHAWLE RCVNAHTRSD
QALFGIVQGG CFPHLRRESA RAVAAFDLPG IAIGGVSVGE PTDDMHRIVR DIGPLLPLDR
PRYLMGIGTL REMAVAVANG IDLFDCVLPT RLGRHGTALV GGERWNLRNA RFRNDHTPLD
SSCSCLACTG HSRAYIHHLI RSDELLGLTL LSLHNITHLV RFTNAMAQAI QDGCFSEDFA
PWQEDSPAHH TW