Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0267 |
Symbol | tgt |
ID | 3742312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 280458 |
End bp | 281576 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637770434 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_376283 |
Protein GI | 78183849 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCAACT TCGAGATCAG CGCCCATTGC CCCCACACGA AGGGGCGATG TGGCTGCTTC CACACCCCGC ATGGCCCGGT GCAGACCCCG CGGTTCATGC CTGTGGGCAC CCTGGCCACA GTGAAAGGGA TCAGCACAGA GCAACTGGCC CGCACGGGAG CCCAGATGGT GCTGTCAAAC ACATATCACC TGCATCTTCA ACCCGGCGAA CAAGTCGTCG CAGAGGCTGG AGGCCTTCAC CGGTTTATGG GGTGGGATGG ACCCATGCTC ACCGATTCAG GGGGATTCCA AGTTTTCAGC CTCGGGAATC TGAACAAGAT TGATGAACGA GGGGTGGTGT TTCGCAACCC GCGAGATGGG CGCACTATCG ACATGACGCC AGAGCATGCC ACCAACATTC AAATGGCCCT TGGCGCTGAT GTGGCGATGG CCTTTGACCA ATGTCCGCCC TACCCAGCAA CAGAAAACGA TGTGAAAGAT GCCTGTCGAC GCACCCACGC CTGGCTTGAA CGCTGCGTCA ATGCCCATAC CCGATCCGAC CAAGCCCTGT TCGGCATCGT TCAAGGTGGC TGCTTCCCCC ACCTCCGTCG CGAAAGCGCT CGAGCCGTCG CCGCCTTCGA CCTTCCTGGC ATCGCCATCG GCGGCGTCAG CGTGGGCGAA CCGACGGACG ACATGCATCG AATCGTGCGC GACATCGGTC CGCTCTTACC GCTGGATCGA CCCCGTTACC TCATGGGGAT TGGCACGTTG CGTGAGATGG CCGTTGCCGT CGCCAACGGC ATCGATTTAT TCGATTGCGT ACTCCCCACT CGCCTGGGCC GCCATGGCAC AGCACTGGTG GGTGGAGAAC GCTGGAACCT CCGCAATGCC CGCTTCAGGA ATGACCACAC GCCCCTTGAT TCCAGCTGTT CGTGTTTGGC CTGTACGGGC CATAGCCGCG CTTACATCCA CCATCTAATT CGCAGCGACG AGCTCCTGGG ACTCACACTG CTGAGCCTGC ACAACATCAC GCATCTGGTG CGATTCACCA ATGCCATGGC TCAAGCCATC CAAGACGGCT GTTTTTCAGA GGATTTCGCT CCCTGGCAAG AGGACTCACC AGCCCATCAC ACGTGGTAG
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Protein sequence | MFNFEISAHC PHTKGRCGCF HTPHGPVQTP RFMPVGTLAT VKGISTEQLA RTGAQMVLSN TYHLHLQPGE QVVAEAGGLH RFMGWDGPML TDSGGFQVFS LGNLNKIDER GVVFRNPRDG RTIDMTPEHA TNIQMALGAD VAMAFDQCPP YPATENDVKD ACRRTHAWLE RCVNAHTRSD QALFGIVQGG CFPHLRRESA RAVAAFDLPG IAIGGVSVGE PTDDMHRIVR DIGPLLPLDR PRYLMGIGTL REMAVAVANG IDLFDCVLPT RLGRHGTALV GGERWNLRNA RFRNDHTPLD SSCSCLACTG HSRAYIHHLI RSDELLGLTL LSLHNITHLV RFTNAMAQAI QDGCFSEDFA PWQEDSPAHH TW
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