Gene Syncc9902_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0206 
Symbol 
ID3743016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp217351 
End bp218199 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content57% 
IMG OID637770375 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_376224 
Protein GI78183790 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGCC AGGTTCAACT CGGAAACATC ACGTTCGCGA ACGACCGACC CTTTGTCCTG 
CTGGGCGGCG TGAATGTTCT GGAAGACTTG GACTTCGCAC TGCACTGCGC AAGCCATTAC
AAAACCGTCT GTGAACGCCT TGGCATTCCC TTGGTGTTTA AAGCCTCCTA CGACAAAGCC
AACCGATCCT CCATCCATTC TTTTCGTGGC CCTGGCCTCG AACAAGGGCT AAGCATCCTT
GAAGCCGTCA AAAACACCCA CGGCATCCCA GTGATCACCG ATGTCCATAC CCCCGAGGGG
GCTGTGGCTG CAGCGGCGGT TGCCGACATC ATTCAACTGC CAGCGTTCCT GGCCCGCCAA
ACGGATTTGG TCACCGCGAT GGCCAACACC GGGGCTGTCA TCAACATCAA GAAACCCCAG
TTCCTAAGCC CGGAACAGAT GGCCAACATC GTTGAAAAGT TCAAAGAGTG CGGCAATGAG
CAGTTGTTGT TATGCGAACG CGGCAGCAAT TTTGGCTACG ACAACCTCGT GGTCGACATG
CTCGGTTTTG GGGTCATGAA GCAAACCTGC CAAGACATCC CACTGATTTT CGACGTGACT
CACGCTCTGC AATGTCGCGA TCCCGGATGT GCCGCATCGG GTGGTCGTCG ATCCCAAGTT
GTCGATCTGG CCCGCTCTGG GATGGCCATC GGACTGGCAG GCCTGTTCTT AGAAGCGCAC
CCCAACCCAG CACAAGCTCG TTGCGACGGT CCCAGCGCCC TGCCCCTAAA CCTGCTCGAA
CCATTCCTCA CCCAGGTCAA AGCCATCGAC GATCTCGTGA AGGGCATGCC AATGCTCCAG
ATCAAGTGA
 
Protein sequence
MARQVQLGNI TFANDRPFVL LGGVNVLEDL DFALHCASHY KTVCERLGIP LVFKASYDKA 
NRSSIHSFRG PGLEQGLSIL EAVKNTHGIP VITDVHTPEG AVAAAAVADI IQLPAFLARQ
TDLVTAMANT GAVINIKKPQ FLSPEQMANI VEKFKECGNE QLLLCERGSN FGYDNLVVDM
LGFGVMKQTC QDIPLIFDVT HALQCRDPGC AASGGRRSQV VDLARSGMAI GLAGLFLEAH
PNPAQARCDG PSALPLNLLE PFLTQVKAID DLVKGMPMLQ IK