Gene Syncc9902_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0201 
Symbol 
ID3743011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp211478 
End bp212674 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content62% 
IMG OID637770370 
Productglycosyl transferase, group 1 
Protein accessionYP_376219 
Protein GI78183785 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG ATCTTTGGGT GGTGCTCCCG CATCTAGGGG CAGGAGGGGC TCAAAAAGTG 
GCCCTGCTCG CGGCTGAGCG GTATCTGGCC ATGGGCTGGA GGGTGCGGTT GGTGACGTTG
TTGCCAAACC AGCCGGTTGT GCATGAATTC CCCGTTGGTT TGGTCCACAC CGATCTTGGC
CCGGAGGTCG CGTCGCGATG GGCGCTGTTT TTTACCCCCC AGCGAAGACT GCATCGGCTG
GCGGTGAAAG CGATCTTCAG CCTGGGTTGG CCCCTCGTCG CCTTCGCGCC ATGGCCGGTT
TGGCGTTGGT GTGTGGAGGC GATTGGAGGG CCTCAGGCCG AATTGTTGCG TCGCCGCTGC
GCTGCCGATC GGCCTCAACG GGTGCTTTCG ATGCTTAGTC GCACCAACAT CATCAGTTGC
AGCGCGCTTT GGGATCAGCC CTGTCATCTG GTGGTCTCCG AACGCAATGA TTTGCGTCGT
CAAACCTTGC CGTTCCCCTG GCCGCTGCTG CGGCGCTTGC TGTATCGCCG GGCTGATGTA
CTTACGGCTA ACACTCTTGG AGTGCTGGAG AGCCTGGCTG CTCTTGATGG GCTTCGCGAT
CCGGTGTTGC TGCCTAATCC TTTACCCCAG CGCTCCGGGG TCGAGATGGC CCATGCTGAG
ATGCCACGTC AGGGCTTTAT TGCTGTGGCG CGCCTTGTGC ATCAAAAGGG ATTGGATGTG
TTGATCGATG CCCTCGCCAT GGCCGGTGGA GTAGCGCGAG ATTGGCCGCT CACGCTTGTG
GGCGAAGGCC CGGAGCGAGA GGCACTCATG GCCCAGGTGG CGCGCCTGCA GCTCGGGGAT
CGCGTTCGCT TCCTTGGACA CCGCTCCGAT GTGCCGCACT TGTTGGCAGA AGCAGCGGTG
TTCGTGTTGC CGTCTCGTTT TGAGGGAATG CCCAATGCCT TGCTTGAAGC CATGGCGCAG
GGCCTCGCAG TGGTGGTCAG CGATGCCTCC CCCGGTCCGC TGGAGGAGAT CGACCATGGT
CGAAGTGGAT GGGTTGTACC CAGTGAGGAT GTCGGCGCTC TCGCCCAAGC GCTCGAGTAT
CTGGCGGCTG ATCCATCCCA ACGTCAGAGG CTTGGTGGAA CGGCACGGGA CCAGGTGTTG
TCGCGTGATT GGTCGCAGTT GGCACCGGTC TGGGATGAGG TCTTGGGCGG AACATGA
 
Protein sequence
MSDDLWVVLP HLGAGGAQKV ALLAAERYLA MGWRVRLVTL LPNQPVVHEF PVGLVHTDLG 
PEVASRWALF FTPQRRLHRL AVKAIFSLGW PLVAFAPWPV WRWCVEAIGG PQAELLRRRC
AADRPQRVLS MLSRTNIISC SALWDQPCHL VVSERNDLRR QTLPFPWPLL RRLLYRRADV
LTANTLGVLE SLAALDGLRD PVLLPNPLPQ RSGVEMAHAE MPRQGFIAVA RLVHQKGLDV
LIDALAMAGG VARDWPLTLV GEGPEREALM AQVARLQLGD RVRFLGHRSD VPHLLAEAAV
FVLPSRFEGM PNALLEAMAQ GLAVVVSDAS PGPLEEIDHG RSGWVVPSED VGALAQALEY
LAADPSQRQR LGGTARDQVL SRDWSQLAPV WDEVLGGT