Gene Syncc9902_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0200 
Symbol 
ID3743010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp210303 
End bp211481 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content60% 
IMG OID637770369 
Productputative glycosyl transferase, group 1 
Protein accessionYP_376218 
Protein GI78183784 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGTGA GGCCTGAACT CAGCCGTGGA CGTGTGGTGC TCTACATCGA CAGCCTCAAG 
TTGGGTGGAG CTGAACGGGT GACCCTGCGT TTGGCTAGTT GGTTGCACGC TGCCGGGTGG
GAACCGTTGT TGCTCACCCG CAAACCCATC AGTTGGGATT TCTACTCCGT GCCTACTGGG
GTCTCCCGTC ATGTTGAGCC GGTAGACCCA GCCTGGATGC GTTGTTTGGG ACCGCTGGCT
CTTCCGTTTC GTCTGCTGCG TTTACGCGCT TGGATGAAGC ATCAGCAGGT ATGCCTGGTG
ATTGGGATGA CCACCATTCC TGCGATCAAG ATGCTGTTGG CGCGCAGAGG ACTCGGGATG
CCCTGTGTGG TTTCTGAGCG CAACTACCCA CCGTTGAAGC CCCTCGGTCT GCCCTGGCGT
GTGCTCCGGC GTCTCACTTA TCCCTGGGCT GATCTTCATT TGGTGCAGAC CGAAGCGGTA
GGTCGCTGGT TGCGCCGCCA TCTTGCGGCC GAGCCCCAGT TGTTGCTGCC CAATCCAGTG
ATCTGGCCGT TGCCGGATGG AGAGCCCCGC CTGGATCCAC AGGAGTGGTT GAAGAAAGCG
GGCGTACGTG CCGACGATCC GGTACTGCTG GCGGTTGGGA CGAAAGCGCG GCAAAAGGGC
TTTGATCGCC TGGTGGATTG GTTCCGGGAA TTGGCCCCAC GGCATCCACG GCTGCAGTTG
GTGATCGTTG GGTTGGCTGC TGGTAGCTAT CACGGCCGGG ATCAGCAGCA GGATTTGCGG
CAGCAATTGT CGTTAGACCC CTTGTTTCGT AGTCGCCTCC ACTTCCCTGG CCAGGTTGGG
AATTTGCAGC AGTGGTACGA ACGGGCTCAA GTGTTCGTTT TGTCGTCTCG CTACGAGGGG
TTCCCGAATG TGCTGCTGGA GGCCATGGCG AGTGGATGCT GTTGCATCGC AGCGGATTGC
CCTCAGGGGC CGGCGGAACT GATCAAGGAT GGCCTGAATG GTCGATTAAT TCCGGAGCAG
GCATCGCAGC AGATTTGGGT GGAGGCGATT GATGGGCTTC TACAGACGCC GTTCCAATGC
CAACGCTTTG GTAGTGCGGC ACGAGCCGTT CGAGAGCGTT ATGAGCCAGG TCAGCTGGCG
AGGTCGTTCG TCGATGCGAT GGAGACCCTG CGGAGATGA
 
Protein sequence
MVVRPELSRG RVVLYIDSLK LGGAERVTLR LASWLHAAGW EPLLLTRKPI SWDFYSVPTG 
VSRHVEPVDP AWMRCLGPLA LPFRLLRLRA WMKHQQVCLV IGMTTIPAIK MLLARRGLGM
PCVVSERNYP PLKPLGLPWR VLRRLTYPWA DLHLVQTEAV GRWLRRHLAA EPQLLLPNPV
IWPLPDGEPR LDPQEWLKKA GVRADDPVLL AVGTKARQKG FDRLVDWFRE LAPRHPRLQL
VIVGLAAGSY HGRDQQQDLR QQLSLDPLFR SRLHFPGQVG NLQQWYERAQ VFVLSSRYEG
FPNVLLEAMA SGCCCIAADC PQGPAELIKD GLNGRLIPEQ ASQQIWVEAI DGLLQTPFQC
QRFGSAARAV RERYEPGQLA RSFVDAMETL RR