Gene Syncc9902_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0199 
Symbol 
ID3743649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp208048 
End bp210312 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content57% 
IMG OID637770368 
Producthypothetical protein 
Protein accessionYP_376217 
Protein GI78183783 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGACA TCATTCTTTT GTCGACTGCC GATTGGGACC ATCCCCTCTG GACCAATAAG 
CAGCACACTG CTTTGGCGCT GGCAGAGCTG GGTCATCGCG TCCTCTATGT GGAGTCCCTC
GGTTTGCGTG CGCCTCGGGC AGGCGGACGT GATGCCCGTC GGATTCTGCG TCGCTTGTGC
CGGATGGTCC GTTTGCCACG TCAAGTGGCT CCACGGGTTT GGGTATGGTC TCCGCCGGCT
TTGCCTGGTG GGCAGTCCGG TTGGCCTCTA GCCCTGAATC GACGCCTGAT TCAGCGTGGT
TTAGAGCAGA TGGCCTGGTG GCTGGATTTC AAACACTGGA TTTTGTGGAC CTACAACCCT
CTGACGGCGC TGTATTTGGA TCTGCACAGT CACCCAATCA GTGTTTATCA CTGCGTTGAT
CGCATCCAAG AACAGCCGGG GATGCCAACG GAAAGGATCG ATGCTTGGGA AGAACGCCTG
TGTCGCGCCG CGCAGGTGGT CTTCACCACC TCACCGGATT TGCAGGCCAA CCACTGCCGT
TGGAACCATC ACACCTATTT TCACGGCAAT GTTGCTGATT TTCAGCACTT CAATCGTGCT
TTGCATCAGC CCTCGCTTGC GTGTCCCAAG CCATTAACTC TCATATCTCG ACCGAGGTTG
TTGTTTACAG GGGCGATCGA TGCCTACAAG CTCGATTTGC CCATGACGGT CTCATTGGCA
AGAACCAACC CCAATTGGTC GTTTGTGTTC GTTGGCCCCG TGGGTGAAGC CGACCCGAGC
ACGGAATTGG CTGCCTTGAG GGCGTGCCCC AATGTGTTTG TCGTCGGTTC TCAGCCTTAT
CAGGATCTAC CGGCTTGGGC GGCCCATTCC GATCTTGCGT TGCTGCCTCT CCAGCAAAAC
GGGTACACGC GTCACATGTT CCCGATGAAG TTCTTCGAAT ATCTGGCCGC AGGGCTGCCT
GTGGTGGGAA CGGCGATCCC AGCGTTGAAA ATCCATTCGG ATGTGGCGTG GCTCTGCGAA
CCGGATCCTG TCGCCTTTGC GTCTGCGATT GATCGTGCAC TTCAGGGGCA GGGGCCGGCT
TTGAATGAGC GTCTGGCGCG GGCACAGGCC CATACCTACG CCACTCGTAC TAAATCCATG
CTGACTGTGC TGCGTCGCGT CGGCGTGTTG GCTGAGGCTG AACAGGGCAA TCCTCAACGT
TTTCGTTTGC ATCGTTCGCG TTGGAATCGC GGCAAAACTT GGCTGGTGTC ACCACTGCTG
AAGTGGGTTG GCTTGATGGC CGATCAACTG GTGAGCGCTG GATGTGGCAG GAGTTTCACT
CGGTTGTTTT GTTTTTTGCA GAGCCGCGGT TGGCTTGCAC CCGATCTTCA GAGTCGCCTG
GCGTTTCTGC TGGTGCAGAA CGGTGACTAT CCCCAAGCAC TCGCTGTTCT GGAGCAGCTC
TGGAGGGTGC ATGGTCGCGT GGATGCGATT AAGCGTTTGT TGTTCCGCCG AGGCTCTCGT
CCCCAAGATC GCTACGAGGC CTTGCAGATG TTTGCGGTGT TTGCCACCAG TAAGCATCTT
CCCGAGCATT TCACTGGGTA TTGCTGGATT GTTTTTGCTC ATCGCAGTGC TGATCTCGAG
GATGCAGTCT TGATGCGTCA GGCCTTGGTG GGTGTGGTGG CCTTGGCGGA GCGGTTGGAA
GCGGATCCAG ACACGGTGGT GTGCCTTCGG GACAACCGCC GCAATCGACT CAAAATGCTG
GTGTCTTGTT ATGCAACCCT GCTGCGTCTC CAGTTGGCCC TCGGTGACGC GACTGCTCTT
AAAGCCGTTG GTCGTGCCGG GCTGGCGTTG ATGCAGCGTC TTGATCCAGC GGCTATCGAT
CCGAACACCT CATACCGCTT GACGCGCAAC AGTTTGCGGG TGCTCAGTAT TGCGGCATTG
GAGGCGGTTG AGTCCAAAGA TTCCGCTTTG CTCGATGCAG TTGCCGATGC GATGGCGGTG
CAGCACCGGC ACATTCATCA GCCCTGCTTC GATCACCAGG CTGCTCAAGA AGATCATCGG
GGTTTTTCCT CCTTGATGCT CGATGCGGCA CATTCGATGG TTCCCACCCT GAGGACGGGT
CTTGATGCCA GCGGTTGCGA TGCTTTGGAG AGATTGCTGG TGCTGGTGAT CAAGAGCGAA
CGCGACCTGG ACGATCCGCA GCGTCAGCTC CGCGCTTTGG CGAAGTCCAA GGCACTTTTT
GCTTCGTTCT GGTCCGGATC GCCTCCGTAC TCACCATGGT CGTGA
 
Protein sequence
MADIILLSTA DWDHPLWTNK QHTALALAEL GHRVLYVESL GLRAPRAGGR DARRILRRLC 
RMVRLPRQVA PRVWVWSPPA LPGGQSGWPL ALNRRLIQRG LEQMAWWLDF KHWILWTYNP
LTALYLDLHS HPISVYHCVD RIQEQPGMPT ERIDAWEERL CRAAQVVFTT SPDLQANHCR
WNHHTYFHGN VADFQHFNRA LHQPSLACPK PLTLISRPRL LFTGAIDAYK LDLPMTVSLA
RTNPNWSFVF VGPVGEADPS TELAALRACP NVFVVGSQPY QDLPAWAAHS DLALLPLQQN
GYTRHMFPMK FFEYLAAGLP VVGTAIPALK IHSDVAWLCE PDPVAFASAI DRALQGQGPA
LNERLARAQA HTYATRTKSM LTVLRRVGVL AEAEQGNPQR FRLHRSRWNR GKTWLVSPLL
KWVGLMADQL VSAGCGRSFT RLFCFLQSRG WLAPDLQSRL AFLLVQNGDY PQALAVLEQL
WRVHGRVDAI KRLLFRRGSR PQDRYEALQM FAVFATSKHL PEHFTGYCWI VFAHRSADLE
DAVLMRQALV GVVALAERLE ADPDTVVCLR DNRRNRLKML VSCYATLLRL QLALGDATAL
KAVGRAGLAL MQRLDPAAID PNTSYRLTRN SLRVLSIAAL EAVESKDSAL LDAVADAMAV
QHRHIHQPCF DHQAAQEDHR GFSSLMLDAA HSMVPTLRTG LDASGCDALE RLLVLVIKSE
RDLDDPQRQL RALAKSKALF ASFWSGSPPY SPWS