Gene Syncc9902_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0183 
Symbol 
ID3743633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp189875 
End bp191251 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content57% 
IMG OID637770352 
ProductCPA2 family Na+/H+ antiporter 
Protein accessionYP_376201 
Protein GI78183767 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTCC CCTCACTGCT GAGCGAAATC AGCAGTCATG ACCTGGAGGT CGCCGAAACG 
CTGATCGGGA TTCTCCGTTT TGTCTTGATT TTCGTGGGTG CACGCACTCT GTCGGAGATT
TTGGTGCGGC TTGAACTGCC CACAATTCTT GGTGAACTGC TGGCTGGCGT GATCATTGGT
GCCTCAGGGC TCCACTTGTT GGTTCCTCCT GAAACGCAAG TTCAGCTCAG CGGTGCTTTT
GCTGATGTGA TTGCCGGAAT GGCGCACATC CCTGCGGAGG AAGTGCCTGT TTTGTACAAC
GAGAGTTTTG GGGCGCTTCA GTCGGTGGCC ACCCTTGGCC TCTATTCACT GCTGTTCCTT
ACGGGACTGG AAAGTGAGCT GGATGAATTG ATGGCTGTTG GGAAGCAGGC CTTCTCGGTG
GCCGTGGTGG GCGTAGTGCT CCCCTTTGCC CTGGGAACCC TTGGCCTGAT GAGCCTTTTC
CATGTCGATG CCATCCCGGC CATTTTTGCG GGGGCATCGA TGACAGCCAC CAGCATTGGT
ATTACGGCCA GCGTGTTTGG AGAACTGGGC TATCTGCGCA CCCGCGAGGG TCAGATCGTG
ATCGGCGCCG CTGTTCTAGA TGACATCCTC GGCATCGTGA TCCTTGCGGT GGTGGTGTCG
TTGGGTGCAG GTGGCAGTCT CGATATCGCT CCGATTATTC AATTAGTCGT CGCCGCAGTG
TTGTTCGTTG TTGTTGCCCT TGTGCTCAGT CGTAAGGCAG CGCCAGCCTT CGATTGGGTA
ATCGATCAGC TCAATGCTCC CGGCGGCAAA TTGGTGGGCT CCTATTTGTT GTTGGGTGCT
AGTTGCTTTG CAGCCACAGC CATTGGTTTA GAGGCGGCCC TCGGCGCTTT CGCCGCTGGT
TTGATCGCCA GCACGTCGAA GCACCGGCAT GAGATTCAAG CGGCGGTGAC GCCCATCGTT
GGCTTGTTTG CCACTGTCTT TTTCGTGCTG GTGGGAGCCG GAATGGATTT GTCGGTGATC
AATCCTTCTG ATCCAGAGGC TCGTTCGGCT TTGGTGATTG CGGCCTTCTT ATTTGTTGTT
GCCGTGATCG GCAAGGTGGT TGCTGGGTGG GCCGTGTTTG GCAAAGAGCC CACCAATCAT
CTGGTGGTGG GGCTGGGCAT GATGCCCCGT GGCGAGGTGG GCTTAATTTT CCTTGGCCTT
GGCACGGCGT CTGGATTGCT TAGCCCAGGG TTGGAAGCAG CGATTCTTTT GATGGTGATC
GGCACCACCT TTTTGGCCCC AGTTCTGCTG CGATTGGTGC TCAAAGACAA GCCGCCAGAG
GATGGCAATC AGGTGCCCGA GGAGTTCGCT GCAGATCCCC TTGGTGGGTC GTCATGA
 
Protein sequence
MLLPSLLSEI SSHDLEVAET LIGILRFVLI FVGARTLSEI LVRLELPTIL GELLAGVIIG 
ASGLHLLVPP ETQVQLSGAF ADVIAGMAHI PAEEVPVLYN ESFGALQSVA TLGLYSLLFL
TGLESELDEL MAVGKQAFSV AVVGVVLPFA LGTLGLMSLF HVDAIPAIFA GASMTATSIG
ITASVFGELG YLRTREGQIV IGAAVLDDIL GIVILAVVVS LGAGGSLDIA PIIQLVVAAV
LFVVVALVLS RKAAPAFDWV IDQLNAPGGK LVGSYLLLGA SCFAATAIGL EAALGAFAAG
LIASTSKHRH EIQAAVTPIV GLFATVFFVL VGAGMDLSVI NPSDPEARSA LVIAAFLFVV
AVIGKVVAGW AVFGKEPTNH LVVGLGMMPR GEVGLIFLGL GTASGLLSPG LEAAILLMVI
GTTFLAPVLL RLVLKDKPPE DGNQVPEEFA ADPLGGSS