Gene Syncc9902_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0178 
Symbol 
ID3743691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp184006 
End bp184854 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID637770347 
ProductVIC family potassium channel protein 
Protein accessionYP_376196 
Protein GI78183762 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1226] Kef-type K+ transport systems, predicted NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCTG ACCGCAGTTT TCGGCAACGG CTTCGCGCCA CGGTTCTGGA GGCCAATACC 
CCGGCCGGAA AGATCTACAA CCTGGTGATC TTCGGGGCGA TTTTGCTCAG CGTGGTGGTG
TTGCTCCTTG AGCCCAATCC CCTCGGCAAT TCAGCGTTGC AGCAAACCGA GGTGCTTTGG
ATCGATCTGG TTCAAGACAG TTGTTTGGCG GTGTTTGCTG CGGATTTTGT GCTGCACCTG
GCGGTGGTGC CCAGTCCGCG CAAGTACCTG TTCAGCTTCA CCGGCTTGAT TGATCTCAGC
GCCGTGTTGT TCTTTTTTGT GCCTCAGGTT CGCAGCGAAT TGCTGCTGTG GGTGTTCAAG
TTTGGCCGCA TTTTGCGGGT GTTCAAGCTG CTCAAATTTA TTGATGAAGC CAAAGTGTTG
GCTCAGGCGT TGCGCGGCAG TGCACGCACC ATTTGTGTGT TCCTGTTCTT TGTGTTCCTG
CTGCAGGTAG TGCTGGGCTA CGCCATCTTT GTAATCGAGA GTGCTGGTCC GAACTCTCAG
TTCGACACGG TTTCGAAAGG GGTGTACTGG GCGATCGTCA CGATGACCAC GGTTGGCTAT
GGCGATGTGG TGCCGCAGAC GGCTTTGGGT CGGTTGTTGG CCTCGGTTGT GATGATGCTC
GGCTTTGGCA TCATTGCGAT TCCAACGGGG ATTCTCACCG TCTCAGGGGT GAAGCACCAC
CAGAACCAGC TGGCTGGAGT GCCCTGTCCT CAATGCGGTC GGCAAGGTCA TCGACGCGAC
GCGCAGCACT GTGATCAGTG TGGAGTGTTG TTAGGAGATT CGGAGTTGAT CTCAGAACCG
ACGTCTTGA
 
Protein sequence
MASDRSFRQR LRATVLEANT PAGKIYNLVI FGAILLSVVV LLLEPNPLGN SALQQTEVLW 
IDLVQDSCLA VFAADFVLHL AVVPSPRKYL FSFTGLIDLS AVLFFFVPQV RSELLLWVFK
FGRILRVFKL LKFIDEAKVL AQALRGSART ICVFLFFVFL LQVVLGYAIF VIESAGPNSQ
FDTVSKGVYW AIVTMTTVGY GDVVPQTALG RLLASVVMML GFGIIAIPTG ILTVSGVKHH
QNQLAGVPCP QCGRQGHRRD AQHCDQCGVL LGDSELISEP TS