| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0168 |
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| Symbol | |
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| ID | 3743681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 173653 |
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| End bp | 175662 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637770336 |
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| Product | transketolase |
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| Protein accession | YP_376186 |
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| Protein GI | 78183752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCTG CGCCCGCATC CCTCGACACC CTCTGCATCA ACAGCATTCG GATGCTGGCG
GTCGATGCGA TCAACAAGTC CAACAGCGGC CACCCCGGCT TGCCCATGGG CTGTGCACCG
ATGGGCTATG CGTTGTGGGA CAAGTTCCTG AATCACAACC CAAAGAACCC CAAATGGTTC
AACCGCGACC GCTTCGTGCT GTCGGCCGGA CACGGCTGCA TGCTGCTGTA TGCGCTACTG
CACCTCACCG GCTACGACTC GGTGAGCATC GACGACATCA AGCAGTTCCG TCAGTGGGGA
TCGAAGACCC CTGGGCACCC CGAAACCTTT GAAACCCCCG GCGTTGAAGT GACGACCGGC
CCCCTGGGTG CTGGTATCGC CAACGCTGTG GGCCTCGCGA TTGCTGAATC CCACCTCGCC
GCCAAGTTCA ACAAGCCCGA CGCCACCCTC GTCGATCACT ACACCTATGT GGTGATGGGC
GACGGCTGCA ACCAGGAAGG CATTTCCTCG GAAGCCTGCT CCCTGGCAGG ACACCTCAAG
CTGGGCAAAC TGATCGCCCT GTACGACGAC AACCACATCA CGATTGACGG CCGCACCGAC
GTGTCGTTCA CCGAGGACGT GCTGAAGCGC TACGAAGCCT ATGGCTGGCA TGTGCAGCAC
GTAGCGGACG GAAACACCGA CGTCGATGCC ATCTCCAAGG CAATCGCAGC GGCCAAGGCA
GTGACAGATA AGCCATCGAT CATCAAGGTG ACCACCACCA TCGGCTACGG CTCCCCCAAC
AAAGCCGACA CCGCAGGTGT TCATGGTGCT GCTCTTGGCG CAGAAGAAGC TGAGCTCACC
CGCAAGCAGT TGGGCTGGAG CTACGGCCCC TTCGAGGTTC CGCAGGAAGC CTACGACCAG
TTCCGTAGTG CAATCGAGCG TGGCGCCAGC AAAGAAGCCG AGTGGAACCA AACCCTCGCC
GCCTACCGCA CTAAATTCCC CACAGAAGCC GCCCAATTCG AGCGGATGCT TCGCGGTGAA
CTTCCCGAAG GTTGGGAGAA GAGCTTGCCG ACTTACACCC CAGACGACGG TGGACTTGCC
ACCCGCAAGC ACTCGCAGAT TTGCTTGGGT GCCTTAGGTC CGAACATTCC TGAGTTAATT
GGAGGCTCCG CGGACCTCAC CCACTCCAAC TACACCGACA TCAAGGGCGA AACGGGCTCC
TATCAACCTG AATCACCGGA GAAGCGCTAC TTGCACTTCG GTGTTCGCGA GCATGCCATG
GCCGCCATCC TCAACGGCAT TGCTTATCAC GACAGTGGTT TGATCCCCTA CGGCGGCACC
TTCTTGGTGT TTGCCGACTA CATGCGCGGC TCCATGCGCC TTTCGGCCTT GAGCATGCTG
GGTGTGATCT ATGTGCTGAC GCACGACTCA ATCGGTGTGG GAGAAGACGG CCCGACCCAC
CAGCCAATCG AAACGATCCC TTCACTGCGG GCGATGCCTG GGATGTTGGT GTTCCGCCCC
GGAGACGGCA ACGAAACCAG CGGCGCCTAC AAGCTGGCGA TTCAAAACCG CAAACGTCCC
AGCTCACTGT GCCTCAGCCG TCAGGGCATG GCCAACCAAG CCAACTCGTC GATCGACAAG
GTTGCACTTG GTGGTTACGT GCTCGAAGAC TGCGCTGGGA CCCCCGATCT GATCCTGATC
GGCACCGGCA CCGAGCTGGA CCTCTGCGTC CAGGCCGCTA AGCAGCTCAC CGCTGATGGC
AAGAAGGTCC GCGTCGTTTC AATGCCTTGT GTCGAACTAT TCGACGAACA GGCCGATGCT
TACAAGGAAG AGGTGCTCCC CAACGCTGTT CGCAAACGGA TCGTGGTAGA AGCAGCTGAA
TCGTTCGGTT GGCACCGTTT CATCGGACTC GATGGCGACA GCATCACCAT GAATCGCTTT
GGTGCTTCAG CTCCAGGCGG AACCTGTTTA AAGGAGTTTG GGTTTACTGT GGACAATGTT
GTCGCCAAAT CCAAGGCGCT GCTGGGCTGA
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| Protein sequence | MVAAPASLDT LCINSIRMLA VDAINKSNSG HPGLPMGCAP MGYALWDKFL NHNPKNPKWF
NRDRFVLSAG HGCMLLYALL HLTGYDSVSI DDIKQFRQWG SKTPGHPETF ETPGVEVTTG
PLGAGIANAV GLAIAESHLA AKFNKPDATL VDHYTYVVMG DGCNQEGISS EACSLAGHLK
LGKLIALYDD NHITIDGRTD VSFTEDVLKR YEAYGWHVQH VADGNTDVDA ISKAIAAAKA
VTDKPSIIKV TTTIGYGSPN KADTAGVHGA ALGAEEAELT RKQLGWSYGP FEVPQEAYDQ
FRSAIERGAS KEAEWNQTLA AYRTKFPTEA AQFERMLRGE LPEGWEKSLP TYTPDDGGLA
TRKHSQICLG ALGPNIPELI GGSADLTHSN YTDIKGETGS YQPESPEKRY LHFGVREHAM
AAILNGIAYH DSGLIPYGGT FLVFADYMRG SMRLSALSML GVIYVLTHDS IGVGEDGPTH
QPIETIPSLR AMPGMLVFRP GDGNETSGAY KLAIQNRKRP SSLCLSRQGM ANQANSSIDK
VALGGYVLED CAGTPDLILI GTGTELDLCV QAAKQLTADG KKVRVVSMPC VELFDEQADA
YKEEVLPNAV RKRIVVEAAE SFGWHRFIGL DGDSITMNRF GASAPGGTCL KEFGFTVDNV
VAKSKALLG
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