Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0167 |
Symbol | |
ID | 3743680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 172076 |
End bp | 173476 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637770335 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_376185 |
Protein GI | 78183751 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACTC AATGGGTTTC TGCTCGCAAG GGCCAAGCGA ATGTGTCTCA GATGCATTAC GCCCGCAAGG GTGTGGTCAC TGAAGAGATG GCCTATGTGG CCAAGAGGGA GAACCTGCCC GAATCGTTAA TCATGGAGGA GGTGGCGCGT GGTCGCATGA TCATCCCCGC CAACATCAAT CACACGAATT TGGAGCCAAT GGCGATTGGC ATCGCCAGTA GCTGCAAAGT GAACGCGAAT ATCGGTGCTT CCCCGAATGC TTCCGATGCC GCGGAAGAGG TGAACAAGCT GAAGCTGGCG GTGAAATATG GCGCTGACAC CGTCATGGAT TTATCCACAG GTGGTGTGAA TCTCGACGAG GTACGTACCG CAATCATTGG TGCATCTCCC GTTCCGATTG GAACAGTTCC TGTTTATCAA GCGCTGGAAA GTGTGCATGG TTCGATTGAA AAGTTGGATG AAGATGATTT TCTCCACATT ATTGAGAAGC ACTGCCAGCA GGGAGTTGAC TATCAGACGA TTCATGCGGG TCTGCTAATT GAACATCTAC CTAAGGTGAA GGGTCGAATC ACAGGCATTG TGAGTCGTGG TGGTGGGATT TTGGCGCAGT GGATGTTGTA CCACCACCGT CAAAATCCTT TGTTCACTCG CTTTGACGAT ATTTGCGAAA TTTTTAAGCG CTACGACTGC ACGTTCTCTT TGGGGGATTC ACTGCGGCCC GGTTGCCAAC ATGATGCTTC TGATGCTGCG CAACTGGCCG AGCTCAAAAC TCTTGGAGAG TTAACGCGGC GGGCTTGGAA GCACGATGTA CAGGTCATGG TTGAAGGGCC AGGTCATGTG CCTTTGGATC AGATTGAATT CAACGTGAAA AAACAAATGG AAGAGTGCAA TGAGGCACCC TTCTATGTTC TTGGACCATT GGTGACTGAT ATTGCACCTG GTTATGACCA CATCACCTCT GCGATCGGTG CAGCAATGGC TGGCTGGCAC GGCACTGCGA TGCTCTGTTA TGTGACTCCA AAAGAGCATC TTGGTCTTCC GAATGCAGAG GATGTTCGTG AGGGACTGAT TGCTTACAAA ATTGCTGCGC ATGCGGCAGA TATTGCCCGT CACCGCCCTG GTGCTCGTGA TCGCGATGAT GAATTGAGCC GCGCACGTTA TGCCTTTGAT TGGAACAAAC AATTTGAGTT GTCATTAGAT CCAGAAAGGG CGAAGGAGTA TCACGACGAG ACGTTGCCTG CAGACATCTA TAAGCAAGCA GAGTTTTGCT CGATGTGCGG TCCGAAGCAC TGTCCGATGC AAACCAAGAT CACGGATGAA GATCTCGAAG GGCTTCAAAA AGTTCTTGAG TCACAGGGTG CCGCTGAACT TGCCTCAGTA AAACTTGATA AGGCTGAATA A
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Protein sequence | MRTQWVSARK GQANVSQMHY ARKGVVTEEM AYVAKRENLP ESLIMEEVAR GRMIIPANIN HTNLEPMAIG IASSCKVNAN IGASPNASDA AEEVNKLKLA VKYGADTVMD LSTGGVNLDE VRTAIIGASP VPIGTVPVYQ ALESVHGSIE KLDEDDFLHI IEKHCQQGVD YQTIHAGLLI EHLPKVKGRI TGIVSRGGGI LAQWMLYHHR QNPLFTRFDD ICEIFKRYDC TFSLGDSLRP GCQHDASDAA QLAELKTLGE LTRRAWKHDV QVMVEGPGHV PLDQIEFNVK KQMEECNEAP FYVLGPLVTD IAPGYDHITS AIGAAMAGWH GTAMLCYVTP KEHLGLPNAE DVREGLIAYK IAAHAADIAR HRPGARDRDD ELSRARYAFD WNKQFELSLD PERAKEYHDE TLPADIYKQA EFCSMCGPKH CPMQTKITDE DLEGLQKVLE SQGAAELASV KLDKAE
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