| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0163 |
|---|
| Symbol | |
|---|
| ID | 3743676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 169108 |
|---|
| End bp | 169878 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637770330 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_376181 |
|---|
| Protein GI | 78183747 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGT GGTTGGTTGG CTTTCTGGCG GTGAGCTTGA TCTGGCCCTG GTCCGCCCTC
GCATTGGATC TAAAGGGTCT TTATGAACAG GCTTTAAATG CGAGCCGATC GGGTGATTTT
GTTCAAGCTC TACCGCTATG GGATCGGGTG TTGGAGCAGT CCCCTCAAGA TGCGGCGGCC
TTGAGCAACC GTGGCAATGT GCGGCTGGCG CTTGGCGATC TTGACGGCGC GATTGAGGAT
CAAACTCGAT CGATTGAGTT GGCCCCAGAT GAGGCCGATC CGCATCTGAA CCGCGGCACT
GCGGAGGAAG CATTGCGAGA TTGGTCAGCT GCTGCTGCCG ACTATCTCTG GATCCTTGAA
CGGCAGCCGG ACGATGCGTC CGCCCTGTAC AACCTCGGCA ATGTTCGTGG CTCCGAAGGG
GATTGGGATG GAGCTCGCGA TTTGTATGGG CAGGCTTCCC TTGCTCGGCC GGGCTTTGCG
ATGGCCCGTT CCAGTGAGGC CTTGGCTGCC TGGCAACAGG GTGATCTGGC CTGGGCGGAG
CTGGAGTTGC GCAAGTTGAT CAGGCGTTAT CCCCTCTTTG CCGATGCCAG AGCTGCCTTA
AGTGGTTTGC TGTGGCGTCA GGGTTCTGCC GGAGAAGCCG AAAGCAATTG GGCCGCGGCG
GCGGGGCTGG ATCAGCGCTA TCGCCAGGCA GATTGGTTGG TGGATGTGCG TCGCTGGCCA
CCCCAGCCCA CCCAAGACCT GATGGCTTTT TTGGCTTTGG AGAAGTCTTG A
|
|---|
| Protein sequence | MKRWLVGFLA VSLIWPWSAL ALDLKGLYEQ ALNASRSGDF VQALPLWDRV LEQSPQDAAA
LSNRGNVRLA LGDLDGAIED QTRSIELAPD EADPHLNRGT AEEALRDWSA AAADYLWILE
RQPDDASALY NLGNVRGSEG DWDGARDLYG QASLARPGFA MARSSEALAA WQQGDLAWAE
LELRKLIRRY PLFADARAAL SGLLWRQGSA GEAESNWAAA AGLDQRYRQA DWLVDVRRWP
PQPTQDLMAF LALEKS
|
|---|
| |