Gene Syncc9902_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0162 
SymbolruvB 
ID3743675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp168068 
End bp169111 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID637770329 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_376180 
Protein GI78183746 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTG TCTCTTCCAG CTCCGGTCGC AAGTCCCCTT GTCGCGAAAC AGCGTTGGTG 
GATCCGCAGC CAGCTCCTGA AGAACAGGTG ATTCGACCGG AAGACAGCTT GCGGCCGAAA
CGCCTATCGG AGTACATCGG CCAAAGCGAG CTCAAGCAGG TGTTGGGCAT CGCTGTTGAG
GCGGCGCTGG GCCGTGGTGA AGCCCTCGAC CACGTGCTGC TCTATGGCCC GCCTGGGCTG
GGAAAAACCA CCATGGCATT GGTGCTTGCT GAGGAGCTTG GGGTGAACTG TCGAATCACC
AGTGCCCCAG CGTTGGAGCG ACCGCGCGAC ATCGTTGGTT TACTCGTGAA TCTCCAGCCG
CGAGATCTGC TCTTTATTGA TGAGATCCAT CGGCTTTCGC GGGTAGCCGA GGAGCTTCTC
TATCCAGCGA TGGAGGATCG TCGCCTGGAT CTCACGGTTG GGAAGGGCAG CACGGCCCGA
ACCCGCACTT TGGATCTTCC GCCCTTCACT CTCGTGGGTG CCACAACGAG GGCAGGTTCC
TTGAGCTCTC CGTTGCGTGA TCGCTTTGGC TTGATTCAGC GTTTGGAGTT TTACGGCCAA
ACCGATCTTG AAGCGATTGT GGCTCGAACC GCCGAGTTGG TGTCGGTGGA TCTCACGTTT
GATGCCTGTG CTCGTATTGC CGCCTCATGC CGAGGGACAC CGCGGATCGC GAACCGTCTG
CTGCGTCGCG TCCGGGATGT GGCCAGTGTG CGCCAGGGAA AGGGAACGAT TGATGACGCG
ATGGTGGCGG AAGCGCTCAG CCTGCATCGC GTGGATCACC GTGGCCTTGA TGCCAGTGAC
CGTCGCTTGC TCGCCATGTT GATGGATCAG CATGGAGGAG GCCCCGTTGG GCTTGAAACA
CTGGCGGCGG CCTTGGGCGA AGACCCCGTC ACGTTGGAAA CAGTTGTCGA ACCATTTTTG
CTCCAGCAGG GCTTACTGGT TCGTACACCG CGGGGACGCA TGGTCACCGA TGCTGCGCGT
TCGCATATCG CGGAGGCCGC ATGA
 
Protein sequence
MAIVSSSSGR KSPCRETALV DPQPAPEEQV IRPEDSLRPK RLSEYIGQSE LKQVLGIAVE 
AALGRGEALD HVLLYGPPGL GKTTMALVLA EELGVNCRIT SAPALERPRD IVGLLVNLQP
RDLLFIDEIH RLSRVAEELL YPAMEDRRLD LTVGKGSTAR TRTLDLPPFT LVGATTRAGS
LSSPLRDRFG LIQRLEFYGQ TDLEAIVART AELVSVDLTF DACARIAASC RGTPRIANRL
LRRVRDVASV RQGKGTIDDA MVAEALSLHR VDHRGLDASD RRLLAMLMDQ HGGGPVGLET
LAAALGEDPV TLETVVEPFL LQQGLLVRTP RGRMVTDAAR SHIAEAA