Gene Syncc9902_0161 details

Gene Information

• Locus tag: Syncc9902_0161
• Symbol: smpB
• ID: 3743674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: -
• Start bp: 167514
• End bp: 168017
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637770328
• Product: SsrA-binding protein
• Protein accession: YP_376179
• Protein GI: 78183745
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAG GAGGAGTCAA AAAAGCCGCC GCTGCCGCCG CCAGGGCCGC CGCAAACCGG 
CTCATGGCCG ACAACCGCCA GGCTCGGCAT CAGTACGAAA TCCTCGAAAC CCTTGAAACA 
GGCATCGAGC TCGTTGGCAC TGAAGTGAAA TCAATCCGCA ATGGCAAAGC AAATCTCCGC 
GATGGTTTTT GCCTGATTCG CAACGGAGAA CTGCAACTTC ACAACGTGCA CATCTCCCCC 
CATAGCCACG CGAGCGCTTA TTTCAATCAC GACCCCTTAC GAACGCGAAA GCTGCTCGCC 
CACCGTCGTG AGATCGACAA GCTACGGGGG CAATTAGACA AAAAAGGACT CGCTCTCATC 
CCCCTGAACA TTCACTTGAA AGGTTCCTGG ATCAAGATCA CAATTGGGGT TGGCAAAGGC 
CGTAAGTTGC ACGACAAACG CGCCGCTGAT AAGGAAAAAC AATCAAAAAA AGAGGTTCGT 
TCTGCCATGG CCAAATATCA ATAA 

 

Protein sequence

MAKGGVKKAA AAAARAAANR LMADNRQARH QYEILETLET GIELVGTEVK SIRNGKANLR 
DGFCLIRNGE LQLHNVHISP HSHASAYFNH DPLRTRKLLA HRREIDKLRG QLDKKGLALI 
PLNIHLKGSW IKITIGVGKG RKLHDKRAAD KEKQSKKEVR SAMAKYQ