| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0120 |
|---|
| Symbol | |
|---|
| ID | 3744034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 127157 |
|---|
| End bp | 128824 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637770287 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_376138 |
|---|
| Protein GI | 78183704 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.51724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG GAAGAATCAT GAATTCGAAT AAAGTAAGTA TATACAACAG GATAAAAGAG
GGACAAGAGG AAGAAGTTTT GAAACCGGAA AACTATCTAG ACATGGGTTT CGATTACCAC
GTAAAAGCTG AATACGAAAA AGCAATAAGA GCCTATGAAA TAGGAACAAG AATAGACAAG
TTGAACGATA AAATATACTG CAAGATGGGA TTAACATATC ACAATCTAGG AAAGCATAAT
ATTGCAATAA AGTACTATAA AAAAGCAACA AAAATAAATA AAGAGAATAG TGAAGCTCAG
TACTATCTTG GATTTATATA TTTACAGGAA AATCAAGATG AAAAAGCTAT TAAGTATCTA
AAAGATGCGT TAAACCTTAA TCCAGAAATA AGCAGGGCAT ACTACTACTT ATGCGAAGCA
TTAACAAGAA ATAATAGAAA AGAGGAAGCA GTTAATATAA TTAAAAAGAG AATTGAGCTA
AATTGTCCAT TAATAACACC AGACGATATC TTTACATTTG GTGAAGTTAT GAGAAAAAGA
GCAATAGAGA AGCATGAATC AAATGACAAA ATAAAAATTA TATTAGATCT TCTTCTAAAA
AGTATTAACA AAAGGGGGAT AGTATGTTTT GGAGACTCGC ATAGGAGTGT ATTTAACAAC
ATACAGAAAA TAAATTGCTA TAACACAGGA TCAGGTACTG CATATAATTT AAATAATGAT
AAAAGCACTT CAGGAAGCGG CAAAAGGATT AAAAAAGTAC TGGAAAATAT AAACAAAGAT
GAATATGCGA TACTACTTGT ATATGGCGAA ATAGATTGCA TGGAACATAT AATGAAAAAT
TCATACAGAG AGGATAAGAA TATAGATGAA ATAACAACAA AGCTGGCAGT AAAGTATACA
GAGTATATAA GGAATCTCAA GAATGAAGGT TACACAGTAC TAGTGTACGG ACCAGCGCTT
AGTGGGTTTT CTTTCAATTC ACACGGAACA CAAGAAGAAA GAAATAGAAT AATGAGGAAT
TTTAATGAGC AAATAGAGAA AAATTTGAGC ACAGAAAAGC GAGTATACTT TGGTAGTATA
AATAAAATCG TAACAAATGA TATGTATGAA CCTGAAATGA AATTAAGTAA AGATGGGAGA
CATTTGGATA ACTTTCCGCA AGGGTCAAAA ATAGTACAAG GAATGATAAT AGGGGAGTTC
ATAAAAGATA TATATTCGAA AAGAAAGAAG ATTAAAAATT ATGCAAAAAG AGAAAGAAAC
TATGCTGAAG GCAAGCCATA CGCAATAGTA TTTGATAAAT CAGATACAGG GATTTACATA
AATGAAGAGC TGTGTTTTGT CAAAAGTAAA TCGATAAAGT TAAAAGAGAA AGAAAAGATG
ACAATAGTAA TCGACATGCT AAATCATTAC AAAATAAAAA ATATTATCAT TGCAATAGAG
AGAATTGACG AAGGATACAT CGATGCAAAA AAAATTGTTA TGGCAGAGAA AGTAATGCTA
TTTAATGAGA AAAAAATAAC ATGTCATTCA GCAGAAATGG ATGAATCAAG ACATAATTCA
TGTTGCATAA TAAAGGGTAA TATAATTGCA AGAGGAGTTT TGATTGAAAT TAAAAATCAT
ATGCCAAGAG AAACGACATT CATGTTAAGG AATATAGAAA TAATCTGA
|
|---|
| Protein sequence | MNYGRIMNSN KVSIYNRIKE GQEEEVLKPE NYLDMGFDYH VKAEYEKAIR AYEIGTRIDK
LNDKIYCKMG LTYHNLGKHN IAIKYYKKAT KINKENSEAQ YYLGFIYLQE NQDEKAIKYL
KDALNLNPEI SRAYYYLCEA LTRNNRKEEA VNIIKKRIEL NCPLITPDDI FTFGEVMRKR
AIEKHESNDK IKIILDLLLK SINKRGIVCF GDSHRSVFNN IQKINCYNTG SGTAYNLNND
KSTSGSGKRI KKVLENINKD EYAILLVYGE IDCMEHIMKN SYREDKNIDE ITTKLAVKYT
EYIRNLKNEG YTVLVYGPAL SGFSFNSHGT QEERNRIMRN FNEQIEKNLS TEKRVYFGSI
NKIVTNDMYE PEMKLSKDGR HLDNFPQGSK IVQGMIIGEF IKDIYSKRKK IKNYAKRERN
YAEGKPYAIV FDKSDTGIYI NEELCFVKSK SIKLKEKEKM TIVIDMLNHY KIKNIIIAIE
RIDEGYIDAK KIVMAEKVML FNEKKITCHS AEMDESRHNS CCIIKGNIIA RGVLIEIKNH
MPRETTFMLR NIEII
|
|---|
| |