| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0118 |
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| Symbol | |
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| ID | 3744032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 124727 |
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| End bp | 125980 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637770285 |
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| Product | hemolysin secretion protein-like |
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| Protein accession | YP_376136 |
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| Protein GI | 78183702 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00640851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGATA AAAAGTTACC GTCTGCTGAT TCAAATAAGT TCAAAGTTTG GGAAGGTAGT
TCTGTTTTTG TTTCGCAGGG TCGTCACTGG TCATCCGCAT TTATCTGGCT ATCTGCCGGT
TTGTTAGGTG TAACTGTGAT TTTTGCCTTC AGTTCAAAGA TTGACCAAAC TGTTAGCGTT
CGCGGTAAAC TATCTCCATC AGGAAGTGTT CAGGATATTG AATCTCCTTC TAGTGGCGTA
GTACTTGATG TTTTTGCATC TGATGGTGAC TTTGTTGAAG CTGGTGACAT ATTACTAACT
GTAGAATCCA AGTCTCTATC TAGTCGTCTA TCAGAGATTA ATGAAAAAAT TCAGCTTCTC
TCTCTTGAAA TTTCTGGCCT CAAGGACATT ATAGAAAGCG GTGGAAAACC AAGTCTCTTT
AAACCTTTGC CTCCTCTTCC GACAGGTATA GATGATGCAC AGTTGGTTTC TCGAATGCTT
ACTGCACGTA ATCAGGTCAA TCAGATAAGG TCTGAACTCA TTAAGGTTGA TATTCGTCTT
CAAAGTAAGA GTTCTTCACT CAACTACCAA ACACAAATTA CTAACGATTT GAAGCCTTTG
TATGACAATG GTGCTATGGC CCGTAACGCT TATTTAGATC AAATAAATCG CCTTCAGGAA
AATAAAGCAG AGTTTTCTAC TCTGGTTACT GAACGTTCGC GCATAGTTGG ATCTGTATCT
TCCCGTGTCA ATTCACTTAA TCAGCAGCTT TTGTCTTTGC GCACCCAATT AACCTCTGTT
AATGAACAAA TTGGCTATCG CAATGTTAAG GCTCCTGTCT CTGGTAGGGT TTTTAACTTG
ATGGCTTCCC CTTATTCCGT TGTTTCCAGT TCGGAGAAAC TACTCACAAT TGTTCCTTCT
AATAATCTTC AAGCTCTAGT TGAAATTCCC AACTCTGATA TTGGTTTTAT AAAAGTCGGT
CAAGCTGTTA GTGTGTCGGT CGACTCTTTC CCTTCCGGTG AGTTTGGTTA TATCCGTGGT
TCACTCATCA GTATTGGTTC TGATGCTCTA CCTCCTGATC AAGATTCACC TCAGCGCTAT
TTTCCAGGAA CTGTTAAATT AGTACAGCAG TCTGTTGTTT CTGGTGATAC TAGTCTCAAC
TTACAAAGTG GTATGAGTAT TACTGCCAAT ATCAAGCTTA GGTCAAGACC AACTATTTCT
ATTTTGACTG ACATCTTTAC TCGTCAATTG GATGGTGTTA AGCGTTTTCG ATAG
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| Protein sequence | MTDKKLPSAD SNKFKVWEGS SVFVSQGRHW SSAFIWLSAG LLGVTVIFAF SSKIDQTVSV
RGKLSPSGSV QDIESPSSGV VLDVFASDGD FVEAGDILLT VESKSLSSRL SEINEKIQLL
SLEISGLKDI IESGGKPSLF KPLPPLPTGI DDAQLVSRML TARNQVNQIR SELIKVDIRL
QSKSSSLNYQ TQITNDLKPL YDNGAMARNA YLDQINRLQE NKAEFSTLVT ERSRIVGSVS
SRVNSLNQQL LSLRTQLTSV NEQIGYRNVK APVSGRVFNL MASPYSVVSS SEKLLTIVPS
NNLQALVEIP NSDIGFIKVG QAVSVSVDSF PSGEFGYIRG SLISIGSDAL PPDQDSPQRY
FPGTVKLVQQ SVVSGDTSLN LQSGMSITAN IKLRSRPTIS ILTDIFTRQL DGVKRFR
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