Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0106 |
Symbol | |
ID | 3744020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 106240 |
End bp | 107097 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637770272 |
Product | hypothetical protein |
Protein accession | YP_376124 |
Protein GI | 78183690 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000918574 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCC TTATCGCTAT TGTTCATTAT TGGAATCCTG ATGGAGGCGG TAGGCATCAA TCTTTGCGTT CGGATCCTCA ACCTCGCATT GATGCACTTC AACATCAATT AATGAATATT CTTCGAATTG GATCTAATCA GTCTGTTTTA CATCTAGCGG ACCGAGCAGT TTACCGTGCT AATGATTCAT ACCGAAATAA CGTAGATATC AAAATTATTA CTGATGGTAC ACATCATGTG CTGGATTATC TCGATCCTAG TTTTATGCAT GCTTTTGAGG AAATACCAAC TACACCATCT AACCCAAAGT TTTTAGGATT TGAAGTTCAC AAAGTTCTTG CCGACCATCT TAACTCAAAT TATGATTTAT ATTGTTATCT AGAGGATGAC TTATTGATTC ACGATCCAAC CTTTTTTTCT AAGATTGCGT GGTTTAGTGG TTTCATGGGT TATCACTCCA TTCTTTTGCC TCAAAGATTT GAATTCTCAC CGTTGCCCCA CGCTGTTGAT CGTTTTTATA TAGATGGTCC TTTGCCAGAA GATGAACTTC GAAAACTAGT CTCCTCCTCT CCGGTTCGTC TTGTCCAGTC TCTAGGCTTT AATATTCCCT TTGCTCCACC AGATAATCCT CATGCCGGAT GCTTTTTTCT TTCACACCAG CAGTTGTCCT ATTGGGTATC TCAAGACTAT TGGTTAGATC ATGATGTCAG TTTTATATCG CCCCTTGAAA GTGCTGCAAC ACTAGGCATA GCAAAGTGTT TTAGTATTTT TAAACCCTGT TTTTCTCATG CCTCCTGGCT CGAAATTCAA CATCATGGAA CCGTTTTTCA TGAGTTAATC GGTGATAGTT TTGCCTAA
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Protein sequence | MNILIAIVHY WNPDGGGRHQ SLRSDPQPRI DALQHQLMNI LRIGSNQSVL HLADRAVYRA NDSYRNNVDI KIITDGTHHV LDYLDPSFMH AFEEIPTTPS NPKFLGFEVH KVLADHLNSN YDLYCYLEDD LLIHDPTFFS KIAWFSGFMG YHSILLPQRF EFSPLPHAVD RFYIDGPLPE DELRKLVSSS PVRLVQSLGF NIPFAPPDNP HAGCFFLSHQ QLSYWVSQDY WLDHDVSFIS PLESAATLGI AKCFSIFKPC FSHASWLEIQ HHGTVFHELI GDSFA
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