Gene Syncc9902_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0102 
Symbol 
ID3744055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp102108 
End bp102827 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content33% 
IMG OID637770268 
Producthypothetical protein 
Protein accessionYP_376120 
Protein GI78183686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0439751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA CGCAATTAAA AGGGTTAACA ATCGCTGGAA AGGAGGATGG ATTTGGTGCA 
CAGTATCAAT CGTGTTTAAG TGGATTTTCA TATGCAAGAA ATATTGGAAT AAAATACATT 
CATACACCAT TCTCGAAAAT ACAACACGGA TTATGTCCAA ATAAAATGAA TGCTTTTACT 
GGACTAAAAT CCGACGAATG GCACAAAGAG GCGAATAACA TTGAATTAAG CTCATACAAT 
ATGATAAAAG AAGTACAGTG GTCAAAAAGG CCATCAATAT ACTATACTGA AGCAGTAATA 
AAAGAGATAA GAAAAATGTA TTACAGCACA GAAAAACCAG GTGTTAAAAA TTATGATGTT 
GCAATTCATA TTCGACGAGG AGATGTGAAT GAAAACATGA CAGAAGAAAA GTTTAGATAT 
GTACCAAACG AGTTTTACAA GAAAATTTTG GACAATATAA GCAAAGGATG TGAAAAATTA 
AATATTTGCA TTGTAAGTGA AGGGAACAAA GAGGATTTCA AGCAATTTCA AGGGTATAAT 
AATATAGACT ATTTGCTAAA TGAGGATGTA CTTAAATCAT TTCATACATT AGTCGAGTCT 
AATATATTAG TGCTGTCAAG AAGTTCATTT TCATACTGCA CTGGAATATT ATCGAGGGGA 
TTGGTGCTAT ACCCTGATTT CTGGCATAGC AAGCTAGACC ATTGGAGAAG AATAAAATAA
 
Protein sequence
MKETQLKGLT IAGKEDGFGA QYQSCLSGFS YARNIGIKYI HTPFSKIQHG LCPNKMNAFT 
GLKSDEWHKE ANNIELSSYN MIKEVQWSKR PSIYYTEAVI KEIRKMYYST EKPGVKNYDV 
AIHIRRGDVN ENMTEEKFRY VPNEFYKKIL DNISKGCEKL NICIVSEGNK EDFKQFQGYN 
NIDYLLNEDV LKSFHTLVES NILVLSRSSF SYCTGILSRG LVLYPDFWHS KLDHWRRIK