| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0068 |
|---|
| Symbol | |
|---|
| ID | 3744060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 67000 |
|---|
| End bp | 68805 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637770234 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_376086 |
|---|
| Protein GI | 78183652 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGC TGGTGCAGAA ATTTGGCGGC ACCTCCGTCG GCAGTGTCGA ACGCATTCAG
GCTGTGGCTC AGCGCATTGC CCGTTGCCGC GAAAACGGAG ACGACGTCGT GGTGGTGGTG
TCCGCCATGG GGCACACCAC CGATGAACTC ACCGGACTGG CGAACGCCTT GAACGACTCC
CCCGCCCAAC GGGAAATGGA CATGTTGCTG GCTAGCGGTG AGCAGGTGTC CAGCGCTTTG
CTCGCCATGG CTCTCCACAG CGAAGGCGTC GCTGCCGTGT CGATGACGGG GCCCCAGGTG
GGCATCGCCA CGGAATCCAC CCATGGCCGA GCCCGAATTC TTGAAATCCG TACTGATCGG
ATCCGCACCC GCCTCAGCGA GGGCAAAGTC ATCGTGGTGG CTGGCTTTCA AGGCACCAGC
ACCAGCAGTG ATGGCATCCA TGAAATCACC ACGCTGGGCC GAGGCGGATC CGACACATCG
GCTGTGGCTT TAGCCGCAGC CCTGGGTGCC GATGCCTGCG AGATCTTCAC CGATGTGCCT
GGAGTGCTGA GCACAGATCC GCGCAAGGTG GCGGATGCCC AACTGATGGA CAGCATCAGC
TGCGATGAAA TGCTCGAGCT GGCCAGTCTG GGCGCCTCGG TGTTGCACCC ACGCGCCGTG
GAGATCGCTC GTAATTACGG GGTGAATCTC GTGGTGCGAT CCAGTTGGAG TGATGCTGCT
GGCACAAAAC TCACCAGCCG CACGGCTCGC CCAATTGGCC ATGGCGGCCT GGAACTCGGG
AGCCCCGTGG ACGGGGTTGA GCAGGTGGAT GGTCAGGCGA TATTGGCGCT ATCGCGGATA
CCTGATCAAC CCGGCATTGC CGCCCGCCTG TTTGAAACCC TTTCAGATGC TGGGATCAAT
GTTGACCTAA TCATTCAGGC CACCCATGAA GGCACCAGCA ACGACATCAC CTTCACCGTG
AACGAACCAG ACCTAGACCA GGCCCGTGAG GTGACACAAC GCGTCCTCAA CAGCCTGGGG
GGTGAACTTT CCTCAGAGGG CGGCCTCACC AAACTGAGCA TTAGCGGCGC CGGCATCATG
GGTCGACCCG GCATTGCGGC GAGTCTGTTC AATTGCCTTT GCCAGCAAGG GATCAACCTG
CGCCTCATAG CCACAAGTGA AGTGAAGGTG AGCTGCGTGA TTGCAGCCAG CTCTGGACGC
AAGGCTTTGC AAGCCGTCCG TGAGGCCTTT GAAGTGGCGG ACTCACAGGT CGCCATCAAT
CCCCCATTGA GCGGCGAAAA CGAACCCGAA GTTCGCGGTG TTGCCCTCGA TCGCGATCAA
GTGCAATTGT CCGTGCGTCA CGTCCCCGAC CGCCCTGGCA CCGCTGCTGC CCTCTGCTCC
TCGTTGGCCG ACAACAGCAT CAGCATCGAC GCAATTGTCC AATCGGAACG TCAACACGCC
GATGACTCCC GCGACATCAG CTTCATCCTG CGCAAAGAAG ACCGTGCCCG GGCTGACGTT
GCTCTCGCCC CCCTACTCGC CCAATGGCCA GGCGCAGCTT TGGAAGACGG CGATGCCATT
GCACGGGTGA GTGCCGTGGG TGCCGGAATG CGAGCCACCG CTGGCACAGC GGGACGTATG
TTTCGGGCCC TCGCCGACGC TCAAATCAAC ATTGGCCTCA TTGCCACCAG TGAGATCCGT
ACGAGCTGTG TGGTGGCGGA GGAAAACGGT GTTCAAGCCC TGCAGGTGGT GCATGCCTGC
TTCGGACTGG GTGGCGACGA ACGGCATCAA GCCCAAGGCA GTGCCTCACC GCTTGAAAAG
ACCTAA
|
|---|
| Protein sequence | MALLVQKFGG TSVGSVERIQ AVAQRIARCR ENGDDVVVVV SAMGHTTDEL TGLANALNDS
PAQREMDMLL ASGEQVSSAL LAMALHSEGV AAVSMTGPQV GIATESTHGR ARILEIRTDR
IRTRLSEGKV IVVAGFQGTS TSSDGIHEIT TLGRGGSDTS AVALAAALGA DACEIFTDVP
GVLSTDPRKV ADAQLMDSIS CDEMLELASL GASVLHPRAV EIARNYGVNL VVRSSWSDAA
GTKLTSRTAR PIGHGGLELG SPVDGVEQVD GQAILALSRI PDQPGIAARL FETLSDAGIN
VDLIIQATHE GTSNDITFTV NEPDLDQARE VTQRVLNSLG GELSSEGGLT KLSISGAGIM
GRPGIAASLF NCLCQQGINL RLIATSEVKV SCVIAASSGR KALQAVREAF EVADSQVAIN
PPLSGENEPE VRGVALDRDQ VQLSVRHVPD RPGTAAALCS SLADNSISID AIVQSERQHA
DDSRDISFIL RKEDRARADV ALAPLLAQWP GAALEDGDAI ARVSAVGAGM RATAGTAGRM
FRALADAQIN IGLIATSEIR TSCVVAEENG VQALQVVHAC FGLGGDERHQ AQGSASPLEK
T
|
|---|
| |