| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0058 |
|---|
| Symbol | |
|---|
| ID | 3744089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 54450 |
|---|
| End bp | 56327 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637770224 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_376076 |
|---|
| Protein GI | 78183642 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCA CCTACCAGCC GCTTCATCAC AAATACCGAC CACAACGCTT TGACCAGCTT
GTGGGGCAGG AAGCGATTAC CGCCACCCTT GGCAATGCAC TGACCAGCAA CAGAATTGCA
CCGGCTTATT TGTTCAGTGG CCCCCGCGGT ACGGGAAAAA CCTCCAGTGC GCGGATCTTG
GCGCGCTCCC TCAATTGTCA AAACAGTGAT GGGCCAACAC CGGAGCCCTG CGGAACTTGC
GATCTATGCC GAACGATAGC TTCGGGTACG GCCCTCGATG TAATCGAAAT TGATGCGGCC
TCCAATACCG GTGTCGACAA CATCCGGGAA TTAATCGAAC GGTCGCGTTT TGCACCGGTT
CAGGCGCGCT GGAAGGTGTA CGTGGTGGAT GAATGCCACA TGCTCTCCAC AGCAGCCTTC
AACGCCCTGC TTAAAACGTT GGAAGAACCA CCCCCGCAGG TGGTGTTCGT ACTGGCCACC
ACCGATCCGC AACGGGTTCT CCCGACCATC CTCAGCCGCT GCCAACGCTT CGATTTCCGA
CGAATTCCCC TCGATGCGCT GGAACAGCAC CTCACCTGGA TCGCGGAACA AGAATCCATC
GCCATCCAAC CCGAAGCCAT CCACGTTGTG GCCCAACGAT CCCAAGGGGG ATTGCGCGAC
GCCGAAAGCT TGTTAGATCA ACTCAGCCTG CTGCCACCCC CGATTGAAGC GAATGCTGTA
TGGGATCTGC TGGGAGCGGT ACCAGAACAA GAGCTCCTAG CGCTGGCGCA GGCCATGACC
AGCTCCGAAC CGGTAGCCCT ACTCGAGGCC ACCCGCAACC TGCTGGACCG CGGCCGTGAT
CCTGGAGCTG TCCTGCAAGG ACTGGCGGGA GTACTGAGGG ATTTGGTGCT GATGGCCGCC
GCCCCCAATC GTCCAGAACT CACGGGCGTA TCACCCCAGT TTCGGGATCA GCTACCTGAA
CTGGCCAAAA GCATCGGCCG GACCCGGCTG TTGCAGTGGC AAGCACAATT GCGTGGGGCT
GAACAGCAGT TGCGACAAAG CGTGCAACCC CGCCTTTGGC TCGAAGTGCT GTTGCTGGGG
CTTTTGGCAG AGCCAATGTC GCCCGCCCTA GCCACAGCGC CGAGAACGCC CCAAGCCACA
CCAGCCCCTG CAGCAGTTCC AGTTCTAGTC ACTGCAGATG CACCTACTCC AACGGCAACA
ACGCCTGCGG CGACAACCCC AGCTACTCCG TCCCCGTCAC CAGCACAGGC AAAAACACCG
GAACTACCCA CAGTGGCGGC GGTAGCCCCA ACTCCAGCCA CGAGTGGCAC CAACCTGCCG
GAGCTGTGGC AGCAAATCTT GGGCAGCTTG GAGTTACCTT CCACCCGCAT GCTGCTGTCC
CAGCAGGCGC AGTTGGTGCG ACTCGATGCG AATCGCGCTG TGGTGCAAGT GGCCGGTAAT
TGGATGGGCA TGGTGCAAAG CCGCGCCAGC TTGCTGGAGC AAGCCGTCGC CAAGGCTTTA
GGCGGGTCGC GTCAGTTGAT CATCGAAGCC AGCACGAGTG CCATTGCTGC CACGTCAGCG
CCAACTGCGC CCCTCGTGCA ACCCCCTCCT CAGACAGCCC CAGCTCCTGT TGAAACTGAG
ACCCCTCAAC TGCCCAAAAC AGAGGTTGTT CCAGCTGTTG TTGACGCATC AACGCCAATC
ACAAGGCTCA CAACACAAGA ACCTGCAAAA CCACCAGCAA CTCCGTCTCC AGTCGCCATT
TCACAACCGG TTCAAGCCGA ACCAGCACAA AATCCTGCAA ACCCCAGCCC AGCATTAGGC
CTCGACCGGC AAGCTAAAAA TCTGGCTGAT TTCTTTAATG GTCAGGTTCT AGACGTGGAT
ACCGACGGGA TTGGTTAA
|
|---|
| Protein sequence | MSSTYQPLHH KYRPQRFDQL VGQEAITATL GNALTSNRIA PAYLFSGPRG TGKTSSARIL
ARSLNCQNSD GPTPEPCGTC DLCRTIASGT ALDVIEIDAA SNTGVDNIRE LIERSRFAPV
QARWKVYVVD ECHMLSTAAF NALLKTLEEP PPQVVFVLAT TDPQRVLPTI LSRCQRFDFR
RIPLDALEQH LTWIAEQESI AIQPEAIHVV AQRSQGGLRD AESLLDQLSL LPPPIEANAV
WDLLGAVPEQ ELLALAQAMT SSEPVALLEA TRNLLDRGRD PGAVLQGLAG VLRDLVLMAA
APNRPELTGV SPQFRDQLPE LAKSIGRTRL LQWQAQLRGA EQQLRQSVQP RLWLEVLLLG
LLAEPMSPAL ATAPRTPQAT PAPAAVPVLV TADAPTPTAT TPAATTPATP SPSPAQAKTP
ELPTVAAVAP TPATSGTNLP ELWQQILGSL ELPSTRMLLS QQAQLVRLDA NRAVVQVAGN
WMGMVQSRAS LLEQAVAKAL GGSRQLIIEA STSAIAATSA PTAPLVQPPP QTAPAPVETE
TPQLPKTEVV PAVVDASTPI TRLTTQEPAK PPATPSPVAI SQPVQAEPAQ NPANPSPALG
LDRQAKNLAD FFNGQVLDVD TDGIG
|
|---|
| |