Gene Syncc9902_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0026 
Symbol 
ID3743167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp26528 
End bp27553 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID637770192 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_376044 
Protein GI78183610 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.502507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGC GCGTTGCGAT CAATGGATTC GGCCGAATTG GTCGCAATGT TTTGCGGGGT 
TGGATCAGCC GTGGGGCAGA TACCGGTTTG GAAATTGTGG GGATGAACTC CACATCTGAT 
CCCAAGACCA GTGCCCACCT ACTTACCTAC GACTCCATTT TGGGGCGTTT GGATCCGTCT 
GTCGACATCC AAACCACTGA TGACACGATG ATCATCAACG GCAAAGAGAT CAAATTCTTT 
GCTGACCGCA ACCCCCTCAA TTGCCCATGG AAGGATTGGG GCGTTGACCT GGTGATCGAA 
TCCACCGGTG TCTTCAACAC TGATGAAAAA GCCAGCATGC ATATCCAGGC TGGTGCCAAA 
AAAGTGATCC TCACTGCTCC TGGTAAGGGC GCTGGTGTGG GCACATTTGT GGTGGGCGTC 
AACGACGATC AGTACCGCCA CGAGGATTGG AACATCCTCA GCAACGCCAG CTGCACCACC 
AACTGTCTGG CTCCAATCGT CAAAGTTTTG GATCAAAACT TCGGCATGGA GTGGGGTCTG 
ATGACCACCA TTCACAGCTA CACCGGTGAC CAGCGAATTC TCGACAACAG CCACCGCGAC 
CTGCGTCGTG CCCGTGCTGC TGCCCTGAAT ATGGTTCCCA CCACAACTGG TGCTGCCAAG 
GCCGTTGCCT TGGTTTATCC CGAAGTGAAG GGCAAGCTCA CCGGTTTTGC CATGCGCGTC 
CCCACTCCAA ACGTGTCGGC AGTTGACCTC ACCTTCGGAA CATCCAAGGG AGCAACTGTT 
GAGCAAGTGC AGGCCGTGAT GAAGGAGGCT GCTGAGAACG GAATGAAGGG GATCATCAAG 
TACAGCGATC TGCCCTTGGT TTCCACCGAC TACGCCGGTA CCAACGAGTC CACCATTTTT 
GATGCCGACC TCACCTACGC CATGGGTGAC AAGGCTGTGA AGATCTTGGC TTGGTACGAC 
AACGAGTGGG GTTACAGCCA GCGTGTTGTT GATTTGGCTG AAGTGGTCGC CAAAAACTGG 
AAGTAA
 
Protein sequence
MTLRVAINGF GRIGRNVLRG WISRGADTGL EIVGMNSTSD PKTSAHLLTY DSILGRLDPS 
VDIQTTDDTM IINGKEIKFF ADRNPLNCPW KDWGVDLVIE STGVFNTDEK ASMHIQAGAK 
KVILTAPGKG AGVGTFVVGV NDDQYRHEDW NILSNASCTT NCLAPIVKVL DQNFGMEWGL 
MTTIHSYTGD QRILDNSHRD LRRARAAALN MVPTTTGAAK AVALVYPEVK GKLTGFAMRV 
PTPNVSAVDL TFGTSKGATV EQVQAVMKEA AENGMKGIIK YSDLPLVSTD YAGTNESTIF 
DADLTYAMGD KAVKILAWYD NEWGYSQRVV DLAEVVAKNW K