Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0016 |
Symbol | |
ID | 3743138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 18735 |
End bp | 19241 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637770181 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_376034 |
Protein GI | 78183600 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.226802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATA GTTCGGCTGT TCTGTCCCGT CGTTCATTGA TGTTTGCTGC ACTAGCTGGT GTTTTTGGGA GTCTGTGGCG GCCCAAAACG GTTCTAGCGG CCTCAAAGGC CAATGATCCT CAGTGGGATC TCAGCCCAGA GGTTTGGCGA GAGCGTCTAT CCCCCCAAGC CTTTGACGTC CTCCGTAACG AGGGCACTGA GCGTCCGTTT ACGAGTCCTT TAAATGATGA AAAACGCAGC GGTAATTACC ACTGCGCCGG ATGCGATTTG GCGTTGTTTT CATCGGAGGG AAAGTTTGAT AGCGGAACGG GTTGGCCCAG TTTTTGGCAA CCACTCAGCG AAGCGATCGA GACGAAAGTA GATTTCAAAT TGATTGTCCC GCGCACGGAA TATCACTGTT CGCGCTGCGG TGGACATCAG GGCCATGTGT TTAATGACGG ACCCCGACCA ACTGGAAAGC GTTACTGCAA CAACGGAGTC GCCCTCGTCT TCCGCCCTGC AACCTGA
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Protein sequence | MTNSSAVLSR RSLMFAALAG VFGSLWRPKT VLAASKANDP QWDLSPEVWR ERLSPQAFDV LRNEGTERPF TSPLNDEKRS GNYHCAGCDL ALFSSEGKFD SGTGWPSFWQ PLSEAIETKV DFKLIVPRTE YHCSRCGGHQ GHVFNDGPRP TGKRYCNNGV ALVFRPAT
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