Gene Syncc9902_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0014 
Symbol 
ID3743136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp17078 
End bp17668 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content66% 
IMG OID637770179 
ProductRNA-binding region RNP-1 
Protein accessionYP_376032 
Protein GI78183598 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0890039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCATTT TTGTTGGCAA CCTTCCCTTC CGCGCTGAGC AGGAGGACGT GACTGAGCTG 
TTTGCTCAGT TCGGTGAAGT CGTGAATTGT GCCCTTCCCC TCGAGCGGGA TACCGGCCGA
AAGCGCGGAT TTGCTTTTGT CGAAATGTCC GACGATGCAG CCGAAGAAGC TGCCATCGAA
GGTCTCCAGG GCGCTGAACT CATGGGCCGC CCGCTTCGTA TCAATAAGGC TGAGCCTCGC
GGAAGCGCCC CACGTCGTGG CGGCGGCGGC GGTGGTTACG GCGGCGGTGG CGGCGGTGGT
GGCTACGGCG GTGGCGGCGG CGGCGGTGGT TACGGCGGCG GTGGCGGCGG TGGTGGCTAC
GGCGGCGGTG GTGGCGGTGG CGGTTACGGC GGCGGCGGCG GCGGCGGTGA TCGCCCCTCT
GGTGCCCGTG GTTGGGAAGA TCGCAGTTAT GGCGCCCGAG ACAGTGCTGC TCCCCAAGGC
GGCAATGCCT ATGACGAAGG CCGTAGTCGT CGTCGTCGCT CCTCTGGTGG CGGTGGTACT
GGTGCCAGTG GTGGTGACGA TTTCTCTGGT TACGGGGGAG CTGAGGGTTA A
 
Protein sequence
MSIFVGNLPF RAEQEDVTEL FAQFGEVVNC ALPLERDTGR KRGFAFVEMS DDAAEEAAIE 
GLQGAELMGR PLRINKAEPR GSAPRRGGGG GGYGGGGGGG GYGGGGGGGG YGGGGGGGGY
GGGGGGGGYG GGGGGGDRPS GARGWEDRSY GARDSAAPQG GNAYDEGRSR RRRSSGGGGT
GASGGDDFSG YGGAEG