| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0006 |
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| Symbol | |
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| ID | 3743128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 8498 |
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| End bp | 9379 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637770171 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_376024 |
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| Protein GI | 78183590 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.437171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTCGAG GAATCAAATT CAAACGAAGC CTGACTGCAG CACTGATCAG CATCAGCAAT
TTTTTCCTGA TCGCTCCAGC CCAAGCCTTG GTGCCCTACG TCTACTTACC AACAGAAGTA
GAGCTCTCGG GATCCTCTCT TGGAATCGGA CGAACCGCAG CTCAACTCCT ACAAATGGGT
CAACCCAAGG AGGCCGCACA ACTGGCTGCT TTAGCTGTTC AGCTCAACCC AAACGATGAA
CGTTTATGGA CTGTGTTGGC TGAAGCACAG CTTCGAAGCA ATCAACTGGA AGACGCCAGT
CAGTCCCTTG CAAAAGCCAA AAAAATCAAC CCCAACAATG CTGGGCTCTG GTTTGCAGAG
GCAGCGATTG CACTACGGGC TCAACGACCG GAGGAAGCGA TTCCGCTCAT TCAACGCGGC
TTGCAAATAG ATGCAAATAA TGCAGCTGCA TACTTCGATC TCGGGAATGC ACGGATCATG
CAAAACAAGC TTGCAATCGC TCTGCAATCC TTTGAAAAAG CAACTGAAAT CAAGCCTGAG
TTTTGGGAAG CCCTCAACAA CCAAGCCCTT GTTCTTTTTG AACTAGGAGA ACATGACGAA
GCCATTCAAC GTTGGCGACG AGTGCTCAAG CTGGATCAGA ACGCAGAACC AATGCTGGCT
TTAGCCGCAG CGCTACACCA AAAGGGCGAA CAGATCGAAG CTCTATCGCT GGCAAAAGAA
GCCCTGTCCA AAAATCCCAA TTACGTTTTG CCGATGCATC AAAAAGAGCA GCTATGGGGT
TCCCATGTGA GGCAAGCCAC AGCAAACTTG TTGCGTGAAG CAGCACTTGC CAGCAGCGTT
GAACGGGCCC AGGCCAATGC CACCTGGAAA AAACGCCAGT GA
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| Protein sequence | MLRGIKFKRS LTAALISISN FFLIAPAQAL VPYVYLPTEV ELSGSSLGIG RTAAQLLQMG
QPKEAAQLAA LAVQLNPNDE RLWTVLAEAQ LRSNQLEDAS QSLAKAKKIN PNNAGLWFAE
AAIALRAQRP EEAIPLIQRG LQIDANNAAA YFDLGNARIM QNKLAIALQS FEKATEIKPE
FWEALNNQAL VLFELGEHDE AIQRWRRVLK LDQNAEPMLA LAAALHQKGE QIEALSLAKE
ALSKNPNYVL PMHQKEQLWG SHVRQATANL LREAALASSV ERAQANATWK KRQ
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