| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_2114 |
|---|
| Symbol | |
|---|
| ID | 3745597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 2345569 |
|---|
| End bp | 2346999 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637770146 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_375999 |
|---|
| Protein GI | 78187956 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTG TATTGACATG GGAGGATTTC AGGAAGTGCG GAGAGCTGGT CCTGAACCCC
GAAGCACATC CCCGCAGGGA GGTGCAGGAT CCGGTTGCGG CCATTGATTC CAGGGCGATC
GACGGGCCGG GGATCTTCAT TGCCCTGAGA GGCGAGTCGA CCGACGGGCA CCGGTTTGTC
CAGGATGTGT TCCGGCGCGG TGCCGACTTT GCGATGGTAT CACGGGAGTG GCACAGCTTG
GAGAAAGATC CGGTTCCTCC TCCCGGCAAA GCATACATCG TCGTGCAGGA TACCGAAAAA
GGCTTGCAGG AACTTGCATC AATCTACCGC GACACCTTTC CGATTCCGGT TGTCGGTATC
GGCGGCAGCA ACGGCAAGAC CACGACGAAG GAGATGACTG CGGCGGTGCT CCGCACCGGA
TTCAAGGTTC ATGTGAGCCG GGGCAACTTC AATAACCATC TCGGTGTTCC CATCACCCTT
CTCGGCATGC GGCGCGACAC CGAAATAGCC GTCGTCGAGA TGGGCATCAA CCATCCCGGC
GAGATGGAAC TGCTTACCGC CATAGCTCGG CCAACCGACG GTCTTCTGAC GAACATCGGC
CACGAGCATC TCGAGTTCCT CATCGACCTA GAGGGCGTCA GGCTGGCCGA ACGCAAGCTG
TTCGACTGGC TCGACCGTTG CAGGGGCACG ATCTTCGTCA ACGCCGACGA CTCCCGCCTC
GCAGATGCCG CCACCGATTC CGAACGCCAC GTTCTCTACG GAACAGGAAG TCCGGAAGGC
CGTATCTGCA GCGCAGAATC AGTTTCCGTC GGCCATGGCG GACGGGTATC GTTCACGCTC
ACTGCAGGTG CAGTGCGGGA GCAGGTCTTT CTGCAGTTCA CCGGCCGGCA TAACGTACAG
AACGCAGTGG CTGCGGCGGC AGTCGGACTG CACTTCGGTC TCTCAACCGC TCAGGTGAAG
GCGGGTCTCG AAGGCCTCCT TCCTGAATCA GGATGGAAAC GGCTCGAGCT CTCGGAGGAG
GGCGGAGTCA CCATCATCAA CGACACATAC AACGCCAATC CGGATTCGAT GCGCCTTGCG
CTCGACACTT TGGCCGACAT GCCATGCAGC GGGCGGAGGA TTGCCGTCAT CGGCGACATG
CTCGAGCTCG GGGCGACTGC AGAAGATGAG CACAGGAGCA TCGGACGCTA TCTTGCCGGC
CTTCCCATCG ACATGTTCTT CACCTTCGGC GCACTTGCCG GCCTCGGCGG CCGTGAGCTG
CCCGAACGGT GCCGGGGGCA TTTTACCGGA AGGGATGAGC TGCTTCATGC CCTTCAGGAA
GAAGTCAGGA GCGGTGACGC GGTGCTCTTC AAGGGATCTC GGGGCATGCA CCTCGAGCAG
ACGGCCGGGG CTCTCATTCT TGAGCTGAAA AAGGGAACAC AAACAAGCTG A
|
|---|
| Protein sequence | MKGVLTWEDF RKCGELVLNP EAHPRREVQD PVAAIDSRAI DGPGIFIALR GESTDGHRFV
QDVFRRGADF AMVSREWHSL EKDPVPPPGK AYIVVQDTEK GLQELASIYR DTFPIPVVGI
GGSNGKTTTK EMTAAVLRTG FKVHVSRGNF NNHLGVPITL LGMRRDTEIA VVEMGINHPG
EMELLTAIAR PTDGLLTNIG HEHLEFLIDL EGVRLAERKL FDWLDRCRGT IFVNADDSRL
ADAATDSERH VLYGTGSPEG RICSAESVSV GHGGRVSFTL TAGAVREQVF LQFTGRHNVQ
NAVAAAAVGL HFGLSTAQVK AGLEGLLPES GWKRLELSEE GGVTIINDTY NANPDSMRLA
LDTLADMPCS GRRIAVIGDM LELGATAEDE HRSIGRYLAG LPIDMFFTFG ALAGLGGREL
PERCRGHFTG RDELLHALQE EVRSGDAVLF KGSRGMHLEQ TAGALILELK KGTQTS
|
|---|
| |