| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_2030 |
|---|
| Symbol | |
|---|
| ID | 3746077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 2259506 |
|---|
| End bp | 2261524 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637770061 |
|---|
| Product | alpha amylase domain-containing protein |
|---|
| Protein accession | YP_375915 |
|---|
| Protein GI | 78187872 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.219861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.850819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA CCTTCCTCCG CTCCGCTCCC CTCTGCTCAC CCAGGGAGTT CGATGGACGG
CAACGGGCCG TTATTGAGCA TGTTTCTCCT GAAGCATACG GTGGATGCCA TCCCGCAAAG
GCGGTTGAGG GCGGACGGGT GCAGGTTGAG GCGGACATTT TCGTCGACGG CGCCGACATG
CTCCGGGCTG AAGTGTGTTT TCGCCCTGCG GGAACGGCTG ACTGGGAATG CTCGCCGATG
GAGCCGAAGG ACAACGATCG CTGGGGCGGC TCGTTCAATG TCGGCCGGCC GGGCCCCTAT
GAATATACGG TCCAGGCATG GGTCGACCAT TTCAGCACCT GGCGAAGGGG ACTCGTGAAA
AAAATCGAAG CGCTTCAGGA CGTTGCCCTC GACCTTGAAA TCGGCGCGCT TCTTGTTGAT
GCGGCCGCCG GCCGCGCCGG TGCGGCCGAC GCAAAAAAAC TCAACGCATC TGCCGCAGCC
ATCCGCGCTA AAGGGCGCGC CAAGGGTAAG GGTGTCGATG CCGCTCTTGA CGCGGCCCTC
GCGATCCTCA TGGAGCGGAA CCCCGACCGT TCGGCGGTTT CGGTGTATGA CCGGGTTCTT
CCGCTTACTG TCGAGCAGGA GAAGGCCGGG TTCAGCACAT GGTATGAATT CTTCCCCCGT
TCATGGGGTT CCGTTCCCGG AAAGCACGGC ACCTTCCGCG ACTGCATGGA GCGCCTGCCC
TTCATCGCCG GCATGGGGTT CGATGTCGTC TATCTTCCTC CCATCCACCC GATCGGCACC
ACGAAAAGGA AAGGAAAGAA CAACGCCCTC AAGGCGGAGC CCGGAGAACC CGGCAGCTGC
TGGGCCATCG GCAGCCCCGA GGGAGGACAC AAGTCGGTCC ATCCCGAGCT CGGCACCATC
GAGGATTTTA CGGCCTTTGT CGCTGCGGCA GGAGCCGAGG GGATTGCCGT TGCGCTCGAT
ATCGCCTTCC AGTGCTCCCC CGACCACCCC TGGGTGCAGG AGCACCCCGA CTGGTTCCGC
TGGCGCCCGG ACGGCACGGT GCAGTTCGCC GAGAACCCCC CGAAGAGGTA TGAGGACATC
CTTCCGATCG ATTTCGAGAC TGCCGACTGG CAGAACCTCT GGATTGAGCT GAAAAGCATC
TTCCTGTTCT GGATCGGAAA AGGGGTGAAG ATCTTCCGCG TCGACAACCC GCACACCAAG
GCATTCGGGT TCTGGGAGTG GGCCATCGCC TCCATCAGGG CGGAGCATCC CGATACGGTG
TTCCTCGCCG AGGCATTCAC CCGCCCGAAG CTCATGGCCC GCCTTGGCAA GATCGGCTAC
AGCCAGTCCT ACAGCTACTT TACCTGGCGC AACACCAAGC ATGAGCTCCA GGAATATATG
AAGGAGCTCA CCACGCCTCC GCTCAGCCAG TTCATGCGGG CGAACTTCTG GCCGAACACC
CCCGACATCC TCCATGAGGA GCTGCAGACC GGCGGCAGGC CGAAATTCAT CATCCGCATG
GTGCTTGCCG CAACCCTCTC GTCGAACTAC GGCATGTACG GCCCCGCCTA TGAGCTCTGC
GAGCACCTGC CGCCGGCACC GGGCAAGGAG GAATATCTTG ATTCGGAAAA GTACGAGATC
CGGGAGTGGG ACCTCGACCG CCCCGGCAAC ATCCGCGCCG AGATCACCCG CATCAACCGC
ATCCGCAGGG AGAATGCCGC TCTGCAGCAG ACCCCGTCCA TCTCTTTCCT CACCATCGAA
GACTCACCCG GCCACGAGAA CGATTGGCTC ATGGGCTACG TCAAGCAGTC CGACGATGGA
GGGAACATCA TTCTCACCGT CGTCAACCTC GACCACCAGC GGCGCCGCAG CGGCTGGATG
CGCTTTCCGC TTGAGCAGTT CGGCCTCTCC CACGACCACG CCTTCAGGGT CGAGGACCTC
TTCAGCGGCA TGCAGTATGA GTGGAGGGGG GAGTGGAACT ATGTGGAGCT TGATCCCTCA
ATCATGCCGG CGCATGTGTT CAGGGTGAGC TTCGGCTGA
|
|---|
| Protein sequence | MKDTFLRSAP LCSPREFDGR QRAVIEHVSP EAYGGCHPAK AVEGGRVQVE ADIFVDGADM
LRAEVCFRPA GTADWECSPM EPKDNDRWGG SFNVGRPGPY EYTVQAWVDH FSTWRRGLVK
KIEALQDVAL DLEIGALLVD AAAGRAGAAD AKKLNASAAA IRAKGRAKGK GVDAALDAAL
AILMERNPDR SAVSVYDRVL PLTVEQEKAG FSTWYEFFPR SWGSVPGKHG TFRDCMERLP
FIAGMGFDVV YLPPIHPIGT TKRKGKNNAL KAEPGEPGSC WAIGSPEGGH KSVHPELGTI
EDFTAFVAAA GAEGIAVALD IAFQCSPDHP WVQEHPDWFR WRPDGTVQFA ENPPKRYEDI
LPIDFETADW QNLWIELKSI FLFWIGKGVK IFRVDNPHTK AFGFWEWAIA SIRAEHPDTV
FLAEAFTRPK LMARLGKIGY SQSYSYFTWR NTKHELQEYM KELTTPPLSQ FMRANFWPNT
PDILHEELQT GGRPKFIIRM VLAATLSSNY GMYGPAYELC EHLPPAPGKE EYLDSEKYEI
REWDLDRPGN IRAEITRINR IRRENAALQQ TPSISFLTIE DSPGHENDWL MGYVKQSDDG
GNIILTVVNL DHQRRRSGWM RFPLEQFGLS HDHAFRVEDL FSGMQYEWRG EWNYVELDPS
IMPAHVFRVS FG
|
|---|
| |