Gene Plut_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_2018 
Symbol 
ID3745862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp2245916 
End bp2247847 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content59% 
IMG OID637770049 
ProductKup system potassium uptake protein 
Protein accessionYP_375903 
Protein GI78187860 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.36441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CATCCAAGAC AGAAGACTCT GATATACGCA GTTCCGTGAT GACCGATCAC 
GGTCCGTCCG GCATGAAACG GCTTGCGGGG CTCTCGCTTG CCGCCCTTGG CGTGGTGTTT
GGTGACATCG GCACGAGCCC GCTGTACGCC GTCAGGGAGT GTTTTCACGG CGAATACGGC
ATCACGGCTT CAGCCGGCAA CGTGCTCGGG GTGCTCTCAC TCCTGTTCTG GGCACTGGTC
CTCATTGTCG GGCTGAAGTA CCTGACCTTT ATCATGCGGG CTGACAACGA CGGTGAAGGG
GGCATCCTCG CCCTTACCGC CCTGATCATC ACCCATAGCC GAAACCGTGG CTATGAACGC
TGGCTTCTCG TCGCAATAGG GCTGTTCGGC GCATCGCTGC TTTACGGGGA CGGGATGATC
ACCCCCGCCA TCTCCGTGCT CAGTGCCATC GAGGGGCTCC AGATCATCGC GCCTGCCTTC
CATGAAATGG TCATCCCTCT CACCATGCTG GTGCTTGCGG GACTCTTTCT GTTCCAGCAT
AACGGAACGG CCCGCGTGGG CGCACTGTTC GGCCCGATCA TTCTGTTATG GTTCATTGCC
ATCGCCATTC TCGGCATTAT CGAGATCGTC AAGTACCCGC AGGTTCTCCA GGCCATGCTT
CCCTGGCACG GGATCTCTTT CCTGCTCGGC AACAATCTCA AAGGGTTCAC CGTGCTCGGT
GCGGTATTCC TGTCCGTGAC AGGCGCAGAG GCCCTCTACG CCGACATGGG GCATTTCGGC
CGACGTCCGA TCCGTATTAC CTGGTTCCTT CTGGTGCTGC CTGCGCTGCT GCTCAACTAC
TTCGGACAGG GCGCCCTGCT GCTGTCTTCT CCCGGCGAGG CGCACCATCC CTTTTACGGG
CTGGTGCCTT CATGGGCCAT GATTCCGATG GTGCTCCTTG CTACATCGGC CACCATCATC
GCATCGCAGG CCTTGATCAC CGGAGTGTTT TCGCTCACCC AGCAGGCCAT ACAGCTCGGA
TACCTGCCGC GTCTTACGGT GACGCACACC TCGGCGCGCC ATATGGGTCA GATATATGTG
CCGGCGGCCA ACTGGTCTCT GATGGTTGGC ACCATCGGCA TCGTTGCATG GTTCGGTTCA
TCCAGCAAGC TTGCCGCGGC GTATGGTGTG GCGGTGACGG CAACGATGCT GATCTCCACC
ATCCTTTTCT ACTATATTGC CCGCGATCTG TGGAAATGGA ATCCGGCCGC ACTCAACGTC
ATGATCACCT TTTTCGCCGC AATTGATCTC TCCTTCTTCG GTGCCAGCAT GAGTAAACTC
TTCCACGGTG CCTGGGTACC GCTTGCGGTT GCCCTCGTCA TGTTCACCAT CATGAACACC
TGGAAGCAGG GCCGGAAGCT GCTCATGCGT CAACTCCAGG ACCGCACCCT CACCGTCGAC
GAGTTCATCA GGAGTCTTGC CCTCCAGCAG CCGCAACGGG TGCCGGGCCA GGTGGTCTAT
CTCACTGCGA ATCCCGATGT GGTTCCAATC GCGCTCCTGC ACAACCTCCG CCACAACAAG
GTGCTGCATT CCGAGGTTGC ACTGTTCCAT TTCAGTAACG AGCGTGTGCC GCGGGTTCCG
AACAGCCGAA AGATCGAGGT CGACCGGCTG GGTGACGGAT TCACCCGCGT GATTGCCCGG
TACGGGTTCC TTGAATATCC CAATATCAGT CAGGTGCTGG CACTCGCCAA CCAGCAGGGC
CTGAACTTCA AGCCCGAGGG CATCAGCTTC TTCCTGAGTC GCGAAAAGAT CGTTGCCGGC
GAGAAGACGA AGATGTTCCC TTCACGCAAG AAGCTCTTTG CCCTCATGGC CCGCAATGCG
CTGAGCGCGA CAGCATACTA CGACCTCCCG TCCGGCCAGG TTATCGAAAT CGGCGTGCAG
GTGCAGATAT AG
 
Protein sequence
MSISSKTEDS DIRSSVMTDH GPSGMKRLAG LSLAALGVVF GDIGTSPLYA VRECFHGEYG 
ITASAGNVLG VLSLLFWALV LIVGLKYLTF IMRADNDGEG GILALTALII THSRNRGYER
WLLVAIGLFG ASLLYGDGMI TPAISVLSAI EGLQIIAPAF HEMVIPLTML VLAGLFLFQH
NGTARVGALF GPIILLWFIA IAILGIIEIV KYPQVLQAML PWHGISFLLG NNLKGFTVLG
AVFLSVTGAE ALYADMGHFG RRPIRITWFL LVLPALLLNY FGQGALLLSS PGEAHHPFYG
LVPSWAMIPM VLLATSATII ASQALITGVF SLTQQAIQLG YLPRLTVTHT SARHMGQIYV
PAANWSLMVG TIGIVAWFGS SSKLAAAYGV AVTATMLIST ILFYYIARDL WKWNPAALNV
MITFFAAIDL SFFGASMSKL FHGAWVPLAV ALVMFTIMNT WKQGRKLLMR QLQDRTLTVD
EFIRSLALQQ PQRVPGQVVY LTANPDVVPI ALLHNLRHNK VLHSEVALFH FSNERVPRVP
NSRKIEVDRL GDGFTRVIAR YGFLEYPNIS QVLALANQQG LNFKPEGISF FLSREKIVAG
EKTKMFPSRK KLFALMARNA LSATAYYDLP SGQVIEIGVQ VQI