Gene Plut_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_2011 
Symbol 
ID3745855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp2238940 
End bp2241384 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content58% 
IMG OID637770042 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_375896 
Protein GI78187853 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.866808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCA GCCTCAACGT TGCATCGCAC ACCATCAGCC AGGTCCCCGG GTTTGCGCGC 
AAGGCGCTTG AAACCGTGAC CGCCCATATC GGCGCGGCAA TCATTCAGGC CCGGCATGAA
GAGGAAATCG CGACAGCAAA GACCAATTTC GAGGTACTCT TCGACACCAT TGACGACTTC
CTCTTCATCG TCGACATGGA TGGTCTGGTC ATCCACACCA ACGAAACGGT CCGCCAGCGG
CTGGGCTATT CGACCGACGA ACTGCAGGGC TGCCATGTGC TCCACTTCCA CCCCGAGGAA
CAGCGGAAAG AGGCCGAAGC CAACATCACG GCGATGCTCA AGGGAACAGG GGATGCATGC
CTCGTGCCGC TGCGAACCAA AAGCGGCGAG CTCATTCCGG TTGAGACACG GGTGACGCCC
GGCACATGGA ACAGCCGCCC GGTGCTCTTC GGCACCAGCC GCGACATGTC CGAACGGATG
CGGGCAGAAG AGACCCTCAT GGAAAGCGAA CGACGCTTCC GGGAGCTGAC CGAGTTCCTG
CCGCTGCCCC TCTTCGAGAT CAACCGGCAG GGCATGGTGA CTTACAGCAA CAACAAGTCA
ACGGAAGTGT TCGGCTACAC CAAGGAGGAG TTTGCCGACA ACTTCCCTGT CGCACGCTTC
ACCGTGGCAG AAGAACGCGA CCGGGCGTTG CTGAACATGA GCCAGATGCT GGCGGGGCAG
CGGCCGGCAA ACAGCACCGA ATACGGAGCA ACAAAAAAAG ACGGCAGCAG GATCCCGATG
CTGCTCTACA GCTCGCCGAT CATGCAGGAG GGCGTAATCA AGGGAATACG CGGCATCGCC
ATCGATCTTA CCGACCTGAA ACAGGCCGAG GACGCGTTGC GCAACATCGC AATTCAGCAA
CGTCTGGTCA GCGAGTTCCA GGCACTTATC GACAACATCC CGGGCGCGGT CTACCGCATC
AACCGGGAGG GAAAAACCGT CATTCTCTCG ATGGTTGACG ACTTCCAGAA CGAATTCTCA
AAAGAGCGGT TCGAGGCAGA GCTGTTCAAC GAGCCCTCCA TCATCCACCC CGACGACCTG
GAAGCCGTTC TCGGATCGAA TCGAACCATC GGAGAATCCG GCACCTCAGA AACCCTCACA
TACAGGATCA TCTCCGCCAG CGGCACCGTT CGATGGATCG AGGACCGCCG CACGCCGGCA
TTCGGGGAAG ACGGCACATT CAACGGCATC GACGGCATCC TGTTCGACAT CACCGAACGG
GTCCGGATAC AGGAGGACAA GCGGGAGCTT GAGTCAAGGC TCCGCAACAC CCAGCGCCTC
GAAACCATCG GCACCCTGGC TGGTGGCATC GCGCACGACT TCAACAATAT CCTCACCCCG
GTGCTCGGAT ACGCCGAGAT GGGGGCGCTT GAGGTTCCGG TGGAGAACCA CCTGCGGGAT
TATTTCAGGG AAATCGTTCA GGCTGCCGAG CGGGCAAAGA ACCTTGTGTC GCAAATCCTG
ACATTCAGCC GGGCCCAGGA GAGCGAAGCG ACAGCGGTCA ACATGCAGTC CATCATCACC
GAAGCCCTCA AACTCCTCCG GCCCTCCATT CCCAGCACCA TCACCATTAA GAGGAATCTC
GACCAGAAAT GCGGAAACAT TCTGGCAGAT CCGTCGCAGA TCCATCAGGT AATCGTCAAC
CTCTGCACCA ACGCCTTCCA GGCGATGGAA CAGTCGGGCG GCACCCTTTC CCTTGAACTC
GGCGAGATTG CTCCCGGGAG CGAACGACTG AAAATGTTCC CCCGCCTGGA ACAGTTGAAC
TGCATCCACC TCTCCATTAC CGATACCGGG TCAGGCATGG ACGAAGCCAC GATGGAGCGC
ATCTTTGAGC CCTTCTTCAC CACGAAATCG GTCAACAAGG GCACCGGGCT CGGCCTGTCG
GTCGTGCACG GCATCATCAC GAGCTACAAT GGCGAAATCA CCGTTGAAAG CCAGCCCGGA
ATCGGAGCCA CCTTCCACGT CTACCTGCCG GTCATCAACG AGGAGATCCA TGAGGAGCCG
ATGCAGGAAC CCATGTCGGG CGGAATCGGG CGCATCCTCT TCGTCGATGA CGAAGTGGCG
ACCGTCAAGC TGATGCAGGA GATGATCCCG AAACTCGGTT TCAGCATCGC ATGCTTCAAC
TCCCCCCACA ACGCCCTCGA GGCATACAGC AAAGAGCCTG ACCGGTTCGA TCTGCTGTTG
ACCGACCTGA CCATGCCGGA GATGACCGGC ATCGAGCTGG CACGAAACAT CCACAAGCTC
AATCCCTCAA TTCCTGTCAT ACTCCTGACA GGTTACGGCA AGGACATCGA ACTCACCTCG
CCGCTCAACC GCTACGGCAT CACGAAGTTC CTGAAAAAAC CGGTCCAGCG AAGCGAACTC
GGAGCAGCAA TCAATGAAGT CATTTCAGCA AATAAGCCCC AATGA
 
Protein sequence
MIGSLNVASH TISQVPGFAR KALETVTAHI GAAIIQARHE EEIATAKTNF EVLFDTIDDF 
LFIVDMDGLV IHTNETVRQR LGYSTDELQG CHVLHFHPEE QRKEAEANIT AMLKGTGDAC
LVPLRTKSGE LIPVETRVTP GTWNSRPVLF GTSRDMSERM RAEETLMESE RRFRELTEFL
PLPLFEINRQ GMVTYSNNKS TEVFGYTKEE FADNFPVARF TVAEERDRAL LNMSQMLAGQ
RPANSTEYGA TKKDGSRIPM LLYSSPIMQE GVIKGIRGIA IDLTDLKQAE DALRNIAIQQ
RLVSEFQALI DNIPGAVYRI NREGKTVILS MVDDFQNEFS KERFEAELFN EPSIIHPDDL
EAVLGSNRTI GESGTSETLT YRIISASGTV RWIEDRRTPA FGEDGTFNGI DGILFDITER
VRIQEDKREL ESRLRNTQRL ETIGTLAGGI AHDFNNILTP VLGYAEMGAL EVPVENHLRD
YFREIVQAAE RAKNLVSQIL TFSRAQESEA TAVNMQSIIT EALKLLRPSI PSTITIKRNL
DQKCGNILAD PSQIHQVIVN LCTNAFQAME QSGGTLSLEL GEIAPGSERL KMFPRLEQLN
CIHLSITDTG SGMDEATMER IFEPFFTTKS VNKGTGLGLS VVHGIITSYN GEITVESQPG
IGATFHVYLP VINEEIHEEP MQEPMSGGIG RILFVDDEVA TVKLMQEMIP KLGFSIACFN
SPHNALEAYS KEPDRFDLLL TDLTMPEMTG IELARNIHKL NPSIPVILLT GYGKDIELTS
PLNRYGITKF LKKPVQRSEL GAAINEVISA NKPQ