| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1995 |
|---|
| Symbol | |
|---|
| ID | 3744260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 2222612 |
|---|
| End bp | 2224315 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637770026 |
|---|
| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
|---|
| Protein accession | YP_375880 |
|---|
| Protein GI | 78187837 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT TTGATATCAT TATCGTCGGA GGGGGGGGCG CCGGGCTCTA CGCTGCCATG
GAAGCGATGA AGACGAATCC GTCGCTGAAC ATCGCCGTGC TCTCGAAGGT CTATCCCAAC
CGGTCCCACA CTTCTGCGGC TCAGGGTGGC GCCAATGCCG CTCTCGGCAA CACCGCCAAG
GATGACTCGG TCGAACTGCA TATTTTCGAC ACCATCAAGG GAAGCGATTA CCTCGCCGAC
CAGGATGCAG CGGAAGTGCT CTGCACCGAG GCCCCGAAAA TCATCCGCGA GCTCGACAAC
ATGGGAACCC CCTGGTCGCG CCTCGACGAC AAGACCATCG CCCAGCGCCC CTTTGGCGGC
GCAGGCCGTC CCCGCTGCTG CTACTGCGCA GACAAGACTG GCCACACGAT TCTGCAGACC
CTCTACGAAC AGTGCCTGAA GAAAGGCGTG GTGTTTTTCA ACGAGTACCT CGCACTCAAC
CTGTCCGTGA AGGGCAGCCG CTCCAAGGGG CTCATCGCCA TGGACATCAA GACCGGCAAG
ATCGAGGCGT TTACCGCAAG GACCGTGATC TTCGCCACCG GCGGCTATGC CAAGATGTAT
TGGAACCGTT CCAGCAATGC CCTCGGCAAC ACCGGTGATG GCCAGGCCAT CGCCTACCGC
GCAGGCATCC CGCTGAAAGA CATGGAGTTC GTCCAGTTCC ACCCGACCGG ACTGCGCAAG
AGCGGCCTGC TCGTCACCGA GGGTGCGCGC GGCGAGGGCG GTTACCTCGT CAACAGCCTC
GGCGAGCGGT TCATGTCGCG TTATGCACCT GAAAAGATGG AGCTCGGACC GAGGGATCTC
GTCTCCCGTT CCATCGAAAC CGAAATTCTC CAGGGCCGCG GCTTCGACAG CCCTGCCGGC
AAATACATCC ACCTTGACCT TACCCATCTC GGTGCCGACC TCATCCGCCA GCGCCTTCCC
CAGATCCGTG AGATGTCGAT GTACTTCGAG GGTGTCGATC CGATCGAGGA GCCCATTCCC
GTCCGCCCGA CGGCCCACTA CTCAATGGGC GGCATTGATA CCGACAATCA GGGCCGTACC
GTGATGGAGG GCGTCTACGC CGCCGGCGAA TGCGCCTGCG TATCCGTCCA CGGCGCCAAC
CGCCTCGGCG GCAACTCCCT GCTCGACATC CTCGTCTTCG GCCGCATCGC AGGCCATACC
GCAGCCGAGG AGGCCCGCAG CTTCGAACCC GGCAATATCA CCGACGCCGA ACTGAAGGAG
CATGCCGACG AGATCCGCAG CTACATGCAG CCTTCTGGCC ACTATGAGCG CTACGGCGCA
CTCCGTGAAG AGCTTGGCCA TACTCTCGGC ACCAACGTCG GCATCTACCG CGAGGCCTCG
CTCCTCCGGA AGGGCATCGA GGACATCGCC GCCCTGAGGG AGCGCTTCAA GAAGGTCAGG
GTGTTTGACT CCAGCGACGT GTTCAACACC AACCTGCTTC AGGTCCTCGA GCTCCGTAAC
ATGCTCGACC TCTCCGAAAC CGTCGCAGCC GGCGCCTATG CCCGTGAAGA GAGCCGCGGT
TCACATACCC GTACCGACTT CCCGACGAGG GACGACGGGA AATGGCACAA GCATACGATG
GCGACCCTTG TCGACGGCAG GTTGGAGCTC GGCGAAAAGC CGGTGACGAT GGGCCGTTAT
GAACTCCAGG AAAGAACTTA TTAA
|
|---|
| Protein sequence | MKPFDIIIVG GGGAGLYAAM EAMKTNPSLN IAVLSKVYPN RSHTSAAQGG ANAALGNTAK
DDSVELHIFD TIKGSDYLAD QDAAEVLCTE APKIIRELDN MGTPWSRLDD KTIAQRPFGG
AGRPRCCYCA DKTGHTILQT LYEQCLKKGV VFFNEYLALN LSVKGSRSKG LIAMDIKTGK
IEAFTARTVI FATGGYAKMY WNRSSNALGN TGDGQAIAYR AGIPLKDMEF VQFHPTGLRK
SGLLVTEGAR GEGGYLVNSL GERFMSRYAP EKMELGPRDL VSRSIETEIL QGRGFDSPAG
KYIHLDLTHL GADLIRQRLP QIREMSMYFE GVDPIEEPIP VRPTAHYSMG GIDTDNQGRT
VMEGVYAAGE CACVSVHGAN RLGGNSLLDI LVFGRIAGHT AAEEARSFEP GNITDAELKE
HADEIRSYMQ PSGHYERYGA LREELGHTLG TNVGIYREAS LLRKGIEDIA ALRERFKKVR
VFDSSDVFNT NLLQVLELRN MLDLSETVAA GAYAREESRG SHTRTDFPTR DDGKWHKHTM
ATLVDGRLEL GEKPVTMGRY ELQERTY
|
|---|
| |