Gene Plut_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1979 
Symbol 
ID3744948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp2203863 
End bp2204690 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID637770009 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_375864 
Protein GI78187821 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00123405 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCC TTCGGAACAT CGCCATCCTG CTTTTCTGCC TTTTTGTGGT AGATATCGTG 
CGCTACTTCG TCATTCCCGA TGTGGAGGGT CTTGCCCGGA AAACCCCGGA GACCACCGCG
TTCATGCGCT ACCGGGTGGA GGCATGGCGC CGTGCCGGAT ACAGCGGAAG GAAGACCGAC
CGGAAGGTCG TCCCTCTCTC CGCCATATCG AAAAACGTCG TCAAGGCTGT GCTGATTGCT
GAAGATGACA AGTTCTGGCA GCATGACGGG TTCGACTACG ATGCGATGGA GCATGCGCTG
GAGAAAAACC TCAAGGAGCG CAAAATCGCC ATGGGCGGGA GCACCGTCAG CCAGCAGCTG
GCAAAGAACC TCTATCTCTC ACCATCGAAG AACCCGGTGC GCAAGATCAA GGAGGCGATC
CTCACCTGGC GGATCGAGCG GTCGCTCTCA AAGAGCCGCA TTCTGGAGCT CTACCTCAAC
TCTGCCGAAT GGGGTGATGG CATTTTCGGC ATTGAAGCCG CTGCCCGCCA CTACTACGGC
ACCAGTGCCG GCCGGCTGAA CGCCCGTCAG GCCTCACGTC TTGCCGCCGT ACTCCCAAAC
CCCATCCGCT GGTCACCCAC CGGCAGTTCC CGTTATGTCC GGAAGCGCTC CGCCATCATT
TACCGCATCA TGCAGAAACG GGGGATTGTG GCGCCATCCT ATGGGGGACG CGTGCCGCTT
CCGGTCGATA CCACGGCTAC GGCGGCAGCC TCAGATACCA TCACGATCGG TGTTCCACGC
GAGCTGATCG ACGGGGTGTT CATGGATTCT GGAGAGGGCG GAAACTGA
 
Protein sequence
MKFLRNIAIL LFCLFVVDIV RYFVIPDVEG LARKTPETTA FMRYRVEAWR RAGYSGRKTD 
RKVVPLSAIS KNVVKAVLIA EDDKFWQHDG FDYDAMEHAL EKNLKERKIA MGGSTVSQQL
AKNLYLSPSK NPVRKIKEAI LTWRIERSLS KSRILELYLN SAEWGDGIFG IEAAARHYYG
TSAGRLNARQ ASRLAAVLPN PIRWSPTGSS RYVRKRSAII YRIMQKRGIV APSYGGRVPL
PVDTTATAAA SDTITIGVPR ELIDGVFMDS GEGGN