Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1970 |
Symbol | |
ID | 3744939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 2192260 |
End bp | 2194326 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637770000 |
Product | IspG protein |
Protein accession | YP_375855 |
Protein GI | 78187812 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGAGT ACCGCCGCCG CCTGACCAGA GAAGTGCCGT TCGGCCCCAT ATCCCTCGGA GGATACCTGC CGATCAGGGT GGAGTCCATG CTCAATACCC ATACCTCCGA TACACGGGCC TCGGTTGAAC AGTGCCGCAG GCTCCATGAT GCGGGCTGCG AAATCATCCG GCTGACCGTC CCTACCGAGA AAGACGCTGA AAACCTCCGC GCCATCCGCG ACCAGCTGCG GCGCGACGGC ATCCGGACGC CGCTTGTGGC CGATATCCAC TTTTCCGCTC GCGCCGCAAT GAAGGCGGTG GAGTTCGTCG AGAACATCCG CATCAATCCG GGCAACTACG CAACCCGCAA GAAGTTTTCA AACGGTGACT ACACGGAGGA CGAATACCAG CAGGAGCTTC TGCATGTCCG CCAGGAATTC CTTCCGCTTG TCGAGAAAGC CCGCAGCCTT GGCGTCTCCA TGCGCATCGG CACCAACCAC GGCTCGCTGT CCGACCGCAT CGTCAGCCGC AGGGGCAACT CCCCGGACGG CATGGTCGAG GCCGCGCTGG AGTTCGCCCG CATCTGCGAA GATGCCGGCT ACTATGACAT CCTCTTCTCC ATGAAGTCTT CCAATGTCAG GGTGATGATC CAGGCATATC GTCTTCTTGT GCAGCGTGCA GACAAGGAGC TTCTCCACGC ATATCCACTC CATCTCGGGG TGACTGAAGC CGGGGATGGT GACGAGGCCA GGGTGAAATC CGCCATGGGC ATCGGCGCCC TGCTTGAGGA CGGTCTTGGC GACACCATAA GGGTATCGCT CACCGAAGAC CCTGTCAACG AGGTGCCTGT CGGTTTCGAG ATCGTACGGA AGTACAACAC GTTCCATCAG GTGAAGGGCA AAAAGGCTCA TCTCCCCCTC AAGCATCTTA TAGAGTCCTC CGGTGAGGCC GGCAGATCGC GTGCCGCAAC GGAGGAGCTT CCTTTTGATC CCGTCAGCTA CAGCCGGCGG AGCTCGGAGC CGCTGGAGAC CGGAGGCCTT GTCATCGGCG GTGAAGCGCT GCCGGTGGTC GAGACTGCGC TGCAGTCACC TCTTTCTGAA GCGGATGGTG CACTGGAGGA AGCTCTCCTG CGGCTTCGCC CCGAGCTGGA GGCGGGTGCC ATCCGCTCCG AGCTCCTCAC GGTTCCCGTG GCCGTCGAAA GTGATCTCCC TCTGCTCCGG AATCTGCTTG GGAGGCTTGG CCCGGCTGCC AGGTCTGTCG GAGCATCGAC GGCTGAAGCA GGGCTTTTTA ATCTTCTTCT CAGGGAGGAT CTCGCCAAAG TCCGCTTCGA GATTACCGAA GAGGAGATGC TTCCGAAAGA TCTTGTCGAC ATGATTCCCG CCGACTGCTT TCCGGCGGTC GAATTTTCGT TCGTACGCCA GCGCTCAGGT GTCGGCGTTG CGGCCGAAGT CCTCGCATCG TTTGCCATGA AAGCCCGAGC CCGCAACCTG CAAAGGGTAC TCTTTTCGGT TGTCTCCTCC GATGGGCTCT ATGCTGCACG CCGCCTCGCC CTTGAGTTCC GCCGCCGCTC CATCAGGGCC CCTGTTTCTG TACGTTTCAG CGGGAGCGAT CCCCTTCGAC TCAGTACCAT AATCGATGCC TCCGTACAGG CCGGTCCGCT TTTTTCCGAT GGACTCGGCG ACATGCTCTC CCTCCAGACG CCGCTGAGTG CCGAGGACGA GATCAGTCTC GGGTTCAATA TCCTGCAGGG TGCCAGGGCC CGTATGTCGA AAACCGAATT CATCTCCTGT CCCGGCTGCG GCAGGACCTA CTTCGACCTT GAGCGTGCCG CCGCTTCCAT CAAAACACGC CTCTCACACC TGAAAGGACT CAAAATCGGC ATCATGGGGT GCGTGGTGAA CGGGCCGGGC GAGATGGCCG ATGCCGATTT CGGCTATGTG GGTGCGGGAA AGAACCGCAT CAGCCTCTAT GTAGGAAAGG AATGCGTTGC CGAGAATCTG CCTGAGGTGG AGGCTGTCGA CCGCCTGATC GATCTCATCC GGGAGCACGG CCGCTGGGTC GAGCCCTCTG CCCCCCTAGA GGACTAG
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Protein sequence | MYEYRRRLTR EVPFGPISLG GYLPIRVESM LNTHTSDTRA SVEQCRRLHD AGCEIIRLTV PTEKDAENLR AIRDQLRRDG IRTPLVADIH FSARAAMKAV EFVENIRINP GNYATRKKFS NGDYTEDEYQ QELLHVRQEF LPLVEKARSL GVSMRIGTNH GSLSDRIVSR RGNSPDGMVE AALEFARICE DAGYYDILFS MKSSNVRVMI QAYRLLVQRA DKELLHAYPL HLGVTEAGDG DEARVKSAMG IGALLEDGLG DTIRVSLTED PVNEVPVGFE IVRKYNTFHQ VKGKKAHLPL KHLIESSGEA GRSRAATEEL PFDPVSYSRR SSEPLETGGL VIGGEALPVV ETALQSPLSE ADGALEEALL RLRPELEAGA IRSELLTVPV AVESDLPLLR NLLGRLGPAA RSVGASTAEA GLFNLLLRED LAKVRFEITE EEMLPKDLVD MIPADCFPAV EFSFVRQRSG VGVAAEVLAS FAMKARARNL QRVLFSVVSS DGLYAARRLA LEFRRRSIRA PVSVRFSGSD PLRLSTIIDA SVQAGPLFSD GLGDMLSLQT PLSAEDEISL GFNILQGARA RMSKTEFISC PGCGRTYFDL ERAAASIKTR LSHLKGLKIG IMGCVVNGPG EMADADFGYV GAGKNRISLY VGKECVAENL PEVEAVDRLI DLIREHGRWV EPSAPLED
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