Gene Plut_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1970 
Symbol 
ID3744939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp2192260 
End bp2194326 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content61% 
IMG OID637770000 
ProductIspG protein 
Protein accessionYP_375855 
Protein GI78187812 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGT ACCGCCGCCG CCTGACCAGA GAAGTGCCGT TCGGCCCCAT ATCCCTCGGA 
GGATACCTGC CGATCAGGGT GGAGTCCATG CTCAATACCC ATACCTCCGA TACACGGGCC
TCGGTTGAAC AGTGCCGCAG GCTCCATGAT GCGGGCTGCG AAATCATCCG GCTGACCGTC
CCTACCGAGA AAGACGCTGA AAACCTCCGC GCCATCCGCG ACCAGCTGCG GCGCGACGGC
ATCCGGACGC CGCTTGTGGC CGATATCCAC TTTTCCGCTC GCGCCGCAAT GAAGGCGGTG
GAGTTCGTCG AGAACATCCG CATCAATCCG GGCAACTACG CAACCCGCAA GAAGTTTTCA
AACGGTGACT ACACGGAGGA CGAATACCAG CAGGAGCTTC TGCATGTCCG CCAGGAATTC
CTTCCGCTTG TCGAGAAAGC CCGCAGCCTT GGCGTCTCCA TGCGCATCGG CACCAACCAC
GGCTCGCTGT CCGACCGCAT CGTCAGCCGC AGGGGCAACT CCCCGGACGG CATGGTCGAG
GCCGCGCTGG AGTTCGCCCG CATCTGCGAA GATGCCGGCT ACTATGACAT CCTCTTCTCC
ATGAAGTCTT CCAATGTCAG GGTGATGATC CAGGCATATC GTCTTCTTGT GCAGCGTGCA
GACAAGGAGC TTCTCCACGC ATATCCACTC CATCTCGGGG TGACTGAAGC CGGGGATGGT
GACGAGGCCA GGGTGAAATC CGCCATGGGC ATCGGCGCCC TGCTTGAGGA CGGTCTTGGC
GACACCATAA GGGTATCGCT CACCGAAGAC CCTGTCAACG AGGTGCCTGT CGGTTTCGAG
ATCGTACGGA AGTACAACAC GTTCCATCAG GTGAAGGGCA AAAAGGCTCA TCTCCCCCTC
AAGCATCTTA TAGAGTCCTC CGGTGAGGCC GGCAGATCGC GTGCCGCAAC GGAGGAGCTT
CCTTTTGATC CCGTCAGCTA CAGCCGGCGG AGCTCGGAGC CGCTGGAGAC CGGAGGCCTT
GTCATCGGCG GTGAAGCGCT GCCGGTGGTC GAGACTGCGC TGCAGTCACC TCTTTCTGAA
GCGGATGGTG CACTGGAGGA AGCTCTCCTG CGGCTTCGCC CCGAGCTGGA GGCGGGTGCC
ATCCGCTCCG AGCTCCTCAC GGTTCCCGTG GCCGTCGAAA GTGATCTCCC TCTGCTCCGG
AATCTGCTTG GGAGGCTTGG CCCGGCTGCC AGGTCTGTCG GAGCATCGAC GGCTGAAGCA
GGGCTTTTTA ATCTTCTTCT CAGGGAGGAT CTCGCCAAAG TCCGCTTCGA GATTACCGAA
GAGGAGATGC TTCCGAAAGA TCTTGTCGAC ATGATTCCCG CCGACTGCTT TCCGGCGGTC
GAATTTTCGT TCGTACGCCA GCGCTCAGGT GTCGGCGTTG CGGCCGAAGT CCTCGCATCG
TTTGCCATGA AAGCCCGAGC CCGCAACCTG CAAAGGGTAC TCTTTTCGGT TGTCTCCTCC
GATGGGCTCT ATGCTGCACG CCGCCTCGCC CTTGAGTTCC GCCGCCGCTC CATCAGGGCC
CCTGTTTCTG TACGTTTCAG CGGGAGCGAT CCCCTTCGAC TCAGTACCAT AATCGATGCC
TCCGTACAGG CCGGTCCGCT TTTTTCCGAT GGACTCGGCG ACATGCTCTC CCTCCAGACG
CCGCTGAGTG CCGAGGACGA GATCAGTCTC GGGTTCAATA TCCTGCAGGG TGCCAGGGCC
CGTATGTCGA AAACCGAATT CATCTCCTGT CCCGGCTGCG GCAGGACCTA CTTCGACCTT
GAGCGTGCCG CCGCTTCCAT CAAAACACGC CTCTCACACC TGAAAGGACT CAAAATCGGC
ATCATGGGGT GCGTGGTGAA CGGGCCGGGC GAGATGGCCG ATGCCGATTT CGGCTATGTG
GGTGCGGGAA AGAACCGCAT CAGCCTCTAT GTAGGAAAGG AATGCGTTGC CGAGAATCTG
CCTGAGGTGG AGGCTGTCGA CCGCCTGATC GATCTCATCC GGGAGCACGG CCGCTGGGTC
GAGCCCTCTG CCCCCCTAGA GGACTAG
 
Protein sequence
MYEYRRRLTR EVPFGPISLG GYLPIRVESM LNTHTSDTRA SVEQCRRLHD AGCEIIRLTV 
PTEKDAENLR AIRDQLRRDG IRTPLVADIH FSARAAMKAV EFVENIRINP GNYATRKKFS
NGDYTEDEYQ QELLHVRQEF LPLVEKARSL GVSMRIGTNH GSLSDRIVSR RGNSPDGMVE
AALEFARICE DAGYYDILFS MKSSNVRVMI QAYRLLVQRA DKELLHAYPL HLGVTEAGDG
DEARVKSAMG IGALLEDGLG DTIRVSLTED PVNEVPVGFE IVRKYNTFHQ VKGKKAHLPL
KHLIESSGEA GRSRAATEEL PFDPVSYSRR SSEPLETGGL VIGGEALPVV ETALQSPLSE
ADGALEEALL RLRPELEAGA IRSELLTVPV AVESDLPLLR NLLGRLGPAA RSVGASTAEA
GLFNLLLRED LAKVRFEITE EEMLPKDLVD MIPADCFPAV EFSFVRQRSG VGVAAEVLAS
FAMKARARNL QRVLFSVVSS DGLYAARRLA LEFRRRSIRA PVSVRFSGSD PLRLSTIIDA
SVQAGPLFSD GLGDMLSLQT PLSAEDEISL GFNILQGARA RMSKTEFISC PGCGRTYFDL
ERAAASIKTR LSHLKGLKIG IMGCVVNGPG EMADADFGYV GAGKNRISLY VGKECVAENL
PEVEAVDRLI DLIREHGRWV EPSAPLED