Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1952 |
Symbol | alaS |
ID | 3745213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 2168577 |
End bp | 2171240 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637769978 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_375837 |
Protein GI | 78187794 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.491503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.143708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCCC GAGAAATCAG GCAGTCCTTC CTGGATTTTT TTGCCGCAAA GAGCCACACC ATCGTCCGTT CCGCTCCGGT CATTCCTGCC GACGACCCGA CGCTTCTTTT TACCAACGCC GGCATGAACC AGTTCAAGGA CGTCTTCCTT GCAAAGGGCA CGAGGCCATA CACCCGTGCA GCCGACACCC AGAAGTGCAT CCGCGCTTCC GGCAAGCACA ACGACCTTGA AGACGTGGGG CGCGATACCT ACCACCACAC CTTTTTCGAG ATGCTCGGCA ACTGGTCGTT CGGCGACTAT TATAAAGAGG AAGCCATCAG CTGGGCCTGG GAGCTCCTCA CCGAAGTATG GAAACTGCCG GCCGACCGGC TCTACGCCAC CGTCTACCAC GACGACGATG AAAGCGCCCG CATCTGGGCG GAGAAGACCT CAATCGAGCC CTCCCACATC CTCCGCTTCG GCGACAAGGA CAACTTCTGG GAGATGGGCG AAACCGGCCC CTGCGGTCCC TGTTCTGAAA TCCATATCGA CCTCACCCCC GACGGCTCCG GAAAAGAACT CGTCAACGCC GGTGACCACC GGGCCATAGA GTTATGGAAC CTTGTCTTCA TCCAGTATGA CCGCCAGCCG GACGGCCGGC TCGAGCCGCT GCCGCAGCGC CATGTCGATA CCGGCATGGG CTTCGAGCGC GTATGCGCCG TCATGCAGTC AAAGGCCTCC AACTATGATA CGGATGTTTT CCTCCCGCTC TTTCAGCGCC TCTCGGAGCT GACGGGCGTC ACCTACGGCG CTTCGATGGA CGGGCGTCAG GACATCGCCA TGCGGGTGAT TGCAGACCAT GCCCGCACCC TCACCTTTGC CCTTTCCGAC GGTGCCATGC CTTCGAACGA AGGGCGCGGC TATGTGCTTC GCCGCATCCT GCGCCGGGCG CTTCGCTACT CAAGGGACCT TGGCTGCAGC GGTCCCATCC TCCATCAGCT TGTCGGTACG CTTGCCGACT CCATGGGCGA CGTGTTCGGC GAGCTGCGCG ACCGCCGTGA TGCGGTCGAG CGCATCATAC GGGCAGAAGA GGAGAGCTTC ATCACGACAC TTGACCGCGG CATGGAGATC TTCGGCGAAC TGGCGGCAGC AACGGCCCGG GCTGGAGGCA GGATGCTGAA GGGAGAAGAT GCCTTCAAGC TCTACGACAC CTACGGGTTC CCGTTCGACC TCACCCGTCT GCTTGCCACC GAGGCAGGCC TTGATGTCGA CGGCGAAGGC TTCGAGCACT GCATGCAGGA GCAGAAATCC CGTGCCAGAA GTGACAGGCG TGAAAAACAG CAGACCGGAG ATGGTGCCGG CAGCTGGCAG TGGTTCAGCG ACAGCCATGC CACCACCTTC CTCGGTTACG ACCGCCTTGC AATGCCCTCA ACCATCATTG GCGCCGCCCA TGCTTCGGGC CATCTTCTTC TGGTCCTTGC CGAGACTCCC TTCTATGCCG AAAGCGGCGG CCAGACAGGC GACCGGGGAT GGCTGGAGAG TGCTGCCTAC CGCATGCAGG TGACCGACAC CCGGAAGGAC GGCGACTCGT TCGTCCACGT TGTCAGCCGC GCCTTCGACA AGGTCCGTGA CACCGAGATC GATCCTATGG ACATAGTGAT TGAAGAGGCC ACTCCCGTTG ATGCATCGGT TGAGCGCATC CTCCGTCAGG AAACCGAGCG AAACCATACC GCAACCCACC TGCTCCACGC CGCGCTCCGC CGCATTCTCG GCAGCCACGT GCAGCAGAAA GGCTCGTTCG TCACCTCAGA GCGTCTGCGG TTCGACTTCA GCCACTTTTC AAAAATGACG CCCGAAGAGA TCCAGGCTGT TGAGGCTGAA GTGAACGAAC ATATCCGCTG TGCCGCACAC GTTTCCAAGC ACGCCGACCT TCCCTACGAT GAGGCCATCG CCAAAGGGGC TCTTGCGTTC TTTGGTGACA AGTACGCTGA GCGTGTCAGG ATGGTCGAAG TGCCGGGCAT CTCTGCGGAG CTCTGCGGCG GCACCCATGT CGACAACATC GGCCAGATCG GCATCTTCAA GATCATCAGC GAGTCCTCCG CAGCCGCCGG CATCCGCCGA ATCGAGGCGC TCACCGGCCG TGCGGCCGAA ATGCTCCTCT GGAAAGAGTA TCATGAACTC CAGGATGTGC GCCAGCAGCT CAAACTGAAG GCGGATGAGG CTGTCGCAGA GAAGTTGGCC GAACTGCAGG AGGAAAAGAA GGAACTTGAA AAAGAACTGG CCGGACTCAA AAGTGCTTCG GTGATCGACG CGCTCGTCCG TGATGCCACA TCGGCCGAGG AGATTGGTGG GTGCCGGATC GTGACGAAGG TGCTCGAAGG TGTCGACGCC GATACCCTCC GTTCGGCGGC CATGGCGCTC CGTGAAAAAC TTCCCGTTTC GGCCGGCCTG CTCTGCAGTA TCGCCGACGG GAAGGTGTCG CTTGCGGCGT TTTCATCGGA CGTGGCGGTG AAGGAAAAAG GCATCGACGC GGGAAAGCTG ATCCGTCTTG CAGCAGCAGC CGTCAAGGGC GGCGGAGGCG GCAGGGCGGA GCTTGCAACA GCAGGCGGGA AAAACCCCGA TGGGGTCGCG GAAGCATGCA GGATTTTTGC TGAAGACGTT CGTAGGATTG CAGGAGCAGT ATAG
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Protein sequence | MHSREIRQSF LDFFAAKSHT IVRSAPVIPA DDPTLLFTNA GMNQFKDVFL AKGTRPYTRA ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKEEAISWAW ELLTEVWKLP ADRLYATVYH DDDESARIWA EKTSIEPSHI LRFGDKDNFW EMGETGPCGP CSEIHIDLTP DGSGKELVNA GDHRAIELWN LVFIQYDRQP DGRLEPLPQR HVDTGMGFER VCAVMQSKAS NYDTDVFLPL FQRLSELTGV TYGASMDGRQ DIAMRVIADH ARTLTFALSD GAMPSNEGRG YVLRRILRRA LRYSRDLGCS GPILHQLVGT LADSMGDVFG ELRDRRDAVE RIIRAEEESF ITTLDRGMEI FGELAAATAR AGGRMLKGED AFKLYDTYGF PFDLTRLLAT EAGLDVDGEG FEHCMQEQKS RARSDRREKQ QTGDGAGSWQ WFSDSHATTF LGYDRLAMPS TIIGAAHASG HLLLVLAETP FYAESGGQTG DRGWLESAAY RMQVTDTRKD GDSFVHVVSR AFDKVRDTEI DPMDIVIEEA TPVDASVERI LRQETERNHT ATHLLHAALR RILGSHVQQK GSFVTSERLR FDFSHFSKMT PEEIQAVEAE VNEHIRCAAH VSKHADLPYD EAIAKGALAF FGDKYAERVR MVEVPGISAE LCGGTHVDNI GQIGIFKIIS ESSAAAGIRR IEALTGRAAE MLLWKEYHEL QDVRQQLKLK ADEAVAEKLA ELQEEKKELE KELAGLKSAS VIDALVRDAT SAEEIGGCRI VTKVLEGVDA DTLRSAAMAL REKLPVSAGL LCSIADGKVS LAAFSSDVAV KEKGIDAGKL IRLAAAAVKG GGGGRAELAT AGGKNPDGVA EACRIFAEDV RRIAGAV
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