Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plut_1866 |
Symbol | |
ID | 3744743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium luteolum DSM 273 |
Kingdom | Bacteria |
Replicon accession | NC_007512 |
Strand | - |
Start bp | 2078123 |
End bp | 2079910 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637769896 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_375757 |
Protein GI | 78187714 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACACCC TCTCCCGCAT TTCCATTTCC AACTTCCGGT CCTGCCAGCA GGTTGACTTT GCATTAGCTG CGTTTACTCC TTTTGTGGGG TATAACAATG CTGGGAAGAG CAATTTGCTG GCGGCTATTC GGTGGTTCAT CGCTCCTTTT GCTCTTGAAG CAGCTGATTT CAATCAGCTC AGTCTGCCTG TTGTTGTTGA AGGAGAGATA AACGGGATTA CTGCAAGTCT TCTTGATAGG CTGGATGTAA AGCATCGTAG CCGGATTGAA CCACTCTTGA TGGATGGTGG CTTACTGCGC TTCCGTCGTG AACTGTCGTC TCCTGGTGCT GCAAGTACGG CAGTGCTTTC TATATGGAAT GTTTCAGCTG GGGACAGCGG GGAATGGGTT ATCAATCCTA CCGGTATTGC TGCAGCGCTG AAGGCGCTGT TTCCTGAGCC AGTCGTTATT GGTGCGATGG AGGATGCTGC TGAGGATTCG AGCAAGGTGA AGTCGAGCAA TACGATCGGT AAACTGCTTG CAGAGTTTTC GGTTGCGCTT GAAGATGCTC ACTCCGGTCA GCTGGCAACG GTTCTTGCTG ATTTGCGTTC GAGTTTCAAT GCTAATGGGG GTAGTCGTTC TGTTACGCTG CAGCGATTTG ATGAAGAGGC TACCTCAGTC CTTCGTGATT ATTTCCCCGG TGTGGCGTTG CACCTTGAAA TCCCAGTGCC TGAAATGGGT GCGTTGCTTA AGGGTGCCAC CGTTAAGGTC AGTGAGGCTG GTGGTGAGGC TCGTGATTTT TCATGTCTCG GTCATGGTGC GCAGCGAAGC ATTCAGATGT CCATGATCCA GTATCTGGCT GAAGTCCGTG AGAGGGCAGT GGGTTCAGGG TCTGAGCCTG GTCAACGGTT GTTGATTATC GACGAACCGG AACTGTTCCT CCATCCGCAG GCAATCGAAC AGGTTCGCGA GGCGTTGAAA AGGTTGTCAC GCAATGGGTG TCAGGTGCTG TTTACCACGC ATTCACCGCT CATGATTGAT CGTGAGTCGG TACCCAATAC CAGGTTGGTT CGCAAGGGAT CCTCTACTAC TGTTGCCTCA ACCCTTGAGA CTGTGTTGCA GCGTTATGTC AATGATGATG GCAGTCGTCT GCAGACATTG CTCGATTTGA AGAACGCCAA GGAGTGGTTG TTTGCGGATC GTGCGCTGCT TGTAGAGGGG ATTACGGAAA CCCGTGTGTT GCCAGTCTTG GTTCAGGCCG TGACCGGTAA AAGCCTCGGT TCCAGAAGTG TTGCTTTGGT GCAGGTGGAT GGCGGTGCAG CTGTTTCAGA TTGCATGAAT GTGCTGGGTG CTATGGGCAT GACCTGTTTT GCGATTGCTG ACCTTGACTA TGTGCTCGAC AAGGCGCCTT CCTCCGGAAT GATTGCAAAG GATGATCCTT TGCTGTTGCG TATGCTTGAA GAGTTCAGGC AACTGGCTGA GCAGGATGAA CGGGTGCGTC TTGATAACGG CAGACCATGT CGGGATAAGG AGCGGAAGGA TAGTCTGAAA CCTTCAGCAG CGGTAACGCT CTGGGCAACA ACGGTTGGAC GAGATACGGC GGACGCAATG CGGGGCGCGC TGCGTTCACA AGAAGTATGG CTGTGGCCAT CTGGAGATAT TGAACACCAT CTTGGACTGC CTGGCAAGAA GGGACCGGCG CAGGCGAAAT TCGTGAACGA TATTGAAGAT CGCGGTTGGC GTGCAGTGGT TTCGGATATA GAGGCCGTTG AAGAACTTGC TTCGTGGTTG GAGGCGGTTT GTGCGTGA
|
Protein sequence | MYTLSRISIS NFRSCQQVDF ALAAFTPFVG YNNAGKSNLL AAIRWFIAPF ALEAADFNQL SLPVVVEGEI NGITASLLDR LDVKHRSRIE PLLMDGGLLR FRRELSSPGA ASTAVLSIWN VSAGDSGEWV INPTGIAAAL KALFPEPVVI GAMEDAAEDS SKVKSSNTIG KLLAEFSVAL EDAHSGQLAT VLADLRSSFN ANGGSRSVTL QRFDEEATSV LRDYFPGVAL HLEIPVPEMG ALLKGATVKV SEAGGEARDF SCLGHGAQRS IQMSMIQYLA EVRERAVGSG SEPGQRLLII DEPELFLHPQ AIEQVREALK RLSRNGCQVL FTTHSPLMID RESVPNTRLV RKGSSTTVAS TLETVLQRYV NDDGSRLQTL LDLKNAKEWL FADRALLVEG ITETRVLPVL VQAVTGKSLG SRSVALVQVD GGAAVSDCMN VLGAMGMTCF AIADLDYVLD KAPSSGMIAK DDPLLLRMLE EFRQLAEQDE RVRLDNGRPC RDKERKDSLK PSAAVTLWAT TVGRDTADAM RGALRSQEVW LWPSGDIEHH LGLPGKKGPA QAKFVNDIED RGWRAVVSDI EAVEELASWL EAVCA
|
| |