| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_1842 |
|---|
| Symbol | |
|---|
| ID | 3744301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 2053205 |
|---|
| End bp | 2055259 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637769875 |
|---|
| Product | polysaccharide biosynthesis protein CapD type |
|---|
| Protein accession | YP_375736 |
|---|
| Protein GI | 78187693 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTG TGTTCGGTTT CTTTGCCGTG CCTGCGTTGG CATTGCCTCG TTTTGTGAAG
CGCTGGCTTG TGCTGGCCAT TGATGCTTTC CTTTGCGTGC TGACGGTCTG GCTTGCGTTT
TATTTGCGCC TGGGCGTGTT TGTGCCGCTT TCCGGACCGG TGCTCTGGCC TGTTGTGGTG
TCGGTGGTGG TGGCGTTGCC TCTCTTTATT CGTTCGGGGC TGTATCGTGC TATTTTCCGT
TACAGCGGGT TGCCGGCAAT GGTAGCTGTG GCGCGTGCGC TATTGCTCTA TATGGTGATG
TTTGCTGGTG TGTTTACTTT TTATGGAGTG CATGGTGTTC CCAGAACCAT CGGGTTGATA
CAGCCGCTGC TGCTGTTTGT GTTTGTGGGG GCATCGCGTG CTGTCGCCCG GGTGTGGCTT
GGTGGCTTGT ATCTCCGCCA GCTTGGGAAT GTGGATTTGC GGAAGATGCT GATATACGGA
GCAGGCAGTG CAGGCCAGCA GCTGGCTTCC GCCATGGCGA GCAGCCCTGA GGTTCGTGTG
GTAGGGTTTC TTGATGATGA CGAGCGTCTG CATGGTCATG TGCAGAACGG TCTGCCTATC
TACAACCCTC TTGATCTTGC TGAAATAGTG GCAGAGGCAG AGGTGTCGGA TGTATTGCTT
GCGCTACCGT CGGTGTCGCG TGAGCGGCGC AATGCCATTC TGGATATCCT TAAGCCCTAT
AAGGTGGCGG TGCGCACCTT GCCAGCCTTG AGCGATATCG TCAACGGTAA GGTCAGTATG
AGCGATGTGC GCGAGCTGGA CCTTGACGAC CTGTTGGGGC GTGAACCTGT TGCCCCCAAT
GGGCAGTTGC TCAACCTGAA CATCCACAAC AAAACGGTGC TCGTGACCGG AGCCGGGGGG
AGCATCGGTA GCGAGCTATG CCGCCAGATC CTCAAAACCA ACCCCCGGCA GCTGCTGTTG
GTGGAAATGA GTGAGTTTGC GCTGTACCAG ATTCATCAGG AACTGCTGGC ATTGTTGAAG
GGAGAGCGAC TTGGTGTCCT TCGGGGTGTT GAGGGTGATG GTGATATGGG GGATCTTTCG
GGAGTAATGC AGCAGGCGCA TGTGGAGATT GTGCCGCTGC TTGCTTCGGT GTGTGATGCG
GTGCGGATGC ATGAGATCAT GGAGACATGG AAGCCGCATA CGGTATACCA TGCAGCAGCA
TACAAGCATG TGCCACTGGT GGAGCATAAT CCGGTTGAAG GGGTGCGCAA CAATGTGTGG
GGAACAAGGG TGTGCGCTGA AGCCGCCCTG CGTCATGGGG TGCGTGATTT TGTGTTGATC
AGTACGGACA AGGCGGTGCG GCCAACCAAC ATCATGGGCG CAACCAAGCG CCTGGCGGAA
ATGGTATTGC AGGCTCTCAG TGAACGGAAC CGGGTAGAAG TATCTGAAAG GGGAGCGGCT
GAGGGGGCAT GTACTTGCTT CTCAATGGTC CGGTTCGGCA ATGTGCTCGG TTCCAGCGGC
TCTGTGGTGC CGTTGTTCCG TGAGCAGATT AAGAACGGTG GGCCGATAAC CTTGACCCAT
GCTGATATCA CCCGGTATTT CATGACCATC CCTGAGGCTG CGCAGCTGGT TATTCAGGCT
GGTACCATGG GGACAGGGGG GGATGTGTTT GTGTTGGACA TGGGCCAGCC GGTCAAGATC
ATTGACTTGG CCCGTCGTAT GGTGGAGCTG TCGGGGTTGA CCCTTAAAGA TGAGGCTCGT
TCCGATGGGG ATATTGAGAT TACAGTTATT GGTCTACGGC CGGGTGAAAA ACTCTATGAA
GAGTTGTTGA TAGGGGAAAA CCCCAAGCCT ACGGAGCATC CGCGCATCAT GAAGGCTCAT
GAGCAGTTCC TGCCATGGGC GGAGCTGGAA GAGAAGCTCA CTCTGTTGCG TCGTGCTATG
AGTGAGAACG ATGTGCCGGT GGTTCGGGGG ATGCTTGAGG AGGTAGTGGC GGATTACCGG
CCAAGCGGGG AGGTTGTGGA CTGGGTTCAT ATGGCTATGG ATCGGTCAGT AGCAGTCAAT
GGACGGGTAT CGTGA
|
|---|
| Protein sequence | MKRVFGFFAV PALALPRFVK RWLVLAIDAF LCVLTVWLAF YLRLGVFVPL SGPVLWPVVV
SVVVALPLFI RSGLYRAIFR YSGLPAMVAV ARALLLYMVM FAGVFTFYGV HGVPRTIGLI
QPLLLFVFVG ASRAVARVWL GGLYLRQLGN VDLRKMLIYG AGSAGQQLAS AMASSPEVRV
VGFLDDDERL HGHVQNGLPI YNPLDLAEIV AEAEVSDVLL ALPSVSRERR NAILDILKPY
KVAVRTLPAL SDIVNGKVSM SDVRELDLDD LLGREPVAPN GQLLNLNIHN KTVLVTGAGG
SIGSELCRQI LKTNPRQLLL VEMSEFALYQ IHQELLALLK GERLGVLRGV EGDGDMGDLS
GVMQQAHVEI VPLLASVCDA VRMHEIMETW KPHTVYHAAA YKHVPLVEHN PVEGVRNNVW
GTRVCAEAAL RHGVRDFVLI STDKAVRPTN IMGATKRLAE MVLQALSERN RVEVSERGAA
EGACTCFSMV RFGNVLGSSG SVVPLFREQI KNGGPITLTH ADITRYFMTI PEAAQLVIQA
GTMGTGGDVF VLDMGQPVKI IDLARRMVEL SGLTLKDEAR SDGDIEITVI GLRPGEKLYE
ELLIGENPKP TEHPRIMKAH EQFLPWAELE EKLTLLRRAM SENDVPVVRG MLEEVVADYR
PSGEVVDWVH MAMDRSVAVN GRVS
|
|---|
| |