Gene Plut_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1688 
Symbol 
ID3744523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1895571 
End bp1896323 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content58% 
IMG OID637769721 
Productpseudouridine synthase, Rsu 
Protein accessionYP_375585 
Protein GI78187542 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAGCA ACGTGGAGAA GAAACAGAAT GAGGCGGTAA GGATCAACCG GTATCTGGCC 
ATGTGCGGCA TTGCCTCGCG CAGGGCCGCA GACCAGATGG TTCTCGAGGG CCGGGTTACC
ATCAACGGCG TCCTTGCCAG TGAGCCCGGC GTGAAGGTGG TGCCGGGAAA GGACGAGGTG
ATTGTCGACG GATCGAAATT CGCCCAGCCT GAGGGCAGGA AGATATACAT CCTTTTCAAC
AAGCCCCGCA ACGTCATCAC CACCAGCAGT GATGAGCGGA ACCGTGAGAT GGTGCTCGAT
TTCATCGACG TCAACGAGCG GGTCTATCCG GTCGGCCGTC TCGACCGCAA GACCACCGGC
GTGCTTCTCC TCACCAATGA CGGGATGCTG GCAAATAAAC TCATGCACCC TTCTTCAAAT
GTGAAAAAAG AGTACATTGC AGTATTGGAC GCACCGTTCC CGCAGGCGTC TCTTCCTCTC
CTCACGGGCG GCATGCGCCT GAGCGATACC GGGGAGAAGG TCAGTCCGTG CCAAGCCAAG
ATCATGGGAG ACGGCTCACA GGTCTGGATC AGCATACATG AAGGAAAGAA CCATCAGGTT
CGCAGGATGT TCAAGACACT CGGCTTTGAA GTAACGCGGC TTGATCGGCC GACCTATGCA
GGTCTCACGG TCGGTGACCT CCGCCGCGGC CAGTGGCGCC ATCTTACGCG CACAGAGGTG
CAGCAGCTTC GCCATCTGGC CGGAAGCCCC TGA
 
Protein sequence
MGSNVEKKQN EAVRINRYLA MCGIASRRAA DQMVLEGRVT INGVLASEPG VKVVPGKDEV 
IVDGSKFAQP EGRKIYILFN KPRNVITTSS DERNREMVLD FIDVNERVYP VGRLDRKTTG
VLLLTNDGML ANKLMHPSSN VKKEYIAVLD APFPQASLPL LTGGMRLSDT GEKVSPCQAK
IMGDGSQVWI SIHEGKNHQV RRMFKTLGFE VTRLDRPTYA GLTVGDLRRG QWRHLTRTEV
QQLRHLAGSP