Gene Plut_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_1484 
Symbol 
ID3745308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp1669570 
End bp1671045 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content59% 
IMG OID637769522 
ProductUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 
Protein accessionYP_375386 
Protein GI78187343 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGT TTCAGGGGAC TCCTCACCCT ATACGGCACC AGCAGCATAT GAGCTCCATC 
TACTTCATCG GCATCGGCGG AACGGCAATG GCATCGGTAG CGGTTGCACT CTCCCGCATC
GGTCACGCAG TCACGGGATC CGACACGGGG CTCTACCCGC CCATGAGCAC CTACCTTGAA
GAACACAACA TCCGCTATTT CAACGGCTTC AACCCCGAGA ACCTGAAACA GGTGATGCCG
GACATGGTTG TGGTCGGCAA TGCGGTAAGC CGGGGCAACG AAGAACTCGA ATATGCCCTG
AACGAAAGAA TGGAGTTGGT GGCGATGCCC GATCTTGTCC GCCGGGAGCT GATCGGCCGC
AACACGTCAA TCGTCGTCGC CGGAACCCAC GGCAAAACCA CGACCACGTC CATCATCGCC
TGGCTGCTCG AATCCGGTGG ACTGAAACCG GGGTTCCTCG TCGGCGGCAT CCCGGAAAAC
TTCGGGATCG GATGCCGGCC GTCGGGACGC AGCGAAGCAG GGTTCTTTGT CAGCGAGGGA
GACGAGTACG ACACCGCCTT TTTCGACAAG CGAAGCAAGT TCCTGCTCTA CCGCCCCGAC
ATCGCCCTTA TAAATAACGT CGAATTCGAC CACGCCGACA TTTTCAATTC ACTCGAGGAG
ATCAAGCGGA GCTTCCGGCT GCTCGTCAAC CTCATCCCCT CAAAAGGGGC GCTCATCGTC
AACGGCGACG ACCCCGTCGC AATGGAGGTA GCCGCGGGAG CACGGTGCAG GCTGGAGACG
TTCGGGCTCA CGGAAGGCTG CGACTGGATG GCCGGGAACA TAGACGTCGG AGAGGAGGGC
TCCACATTCG ACGTGTATTA TAAAGGGAGC CTTTTGCAGC GCTTCCACGC CCCCCTGTTC
GGAAACTACA ACATAACGAA CACCGTGGCC TCCATCGCCG TCGCCACCCT TGCCGGAATG
ACGCTTGAAC AGGTAGAAGA AGGGCTGCCT GGCTTTCTCC GCCCGAAACG CAGAATGGAA
ACCATCGGTA CGTTCGAGGG CAACATCACC CTCGTCGAGG ATTTCGCCCA CCACCCTACG
GCCATCAGGG TCACGCTTGA AGCCATCAGG GAACGCTGGC CCCGGAGGCG CATCCTCACC
TGCTTCGAGC CGCGCTCGAA CACGACCACC CGCAACATCT TCCAAGATGA GCTGGCCGCC
TGCTTCGGGC CGGCCGAGGT TGTGGTGATG GGAAAGGTGC ACCGCCCTGA GCGTTACGGC
CCCGGGGGAA GCCTTGATAC CGGGAAGCTC AAGGAAGCAC TGGAAAGAGA GGGCAAAACC
GTTTTCCTCG CCGGAGCGGA CCCCGATGAC TACCCCGGCG ACATCGTCCG CTTTCTCCAT
GAAAACCTGC AGCCAAACGA TGTCGTGCTC ATGCTCACGA ATGGAAGTTT CGCGGGACTG
AAGTCAGCAT TCACAGAAAG TTTTCAAAAA AAATGA
 
Protein sequence
MKRFQGTPHP IRHQQHMSSI YFIGIGGTAM ASVAVALSRI GHAVTGSDTG LYPPMSTYLE 
EHNIRYFNGF NPENLKQVMP DMVVVGNAVS RGNEELEYAL NERMELVAMP DLVRRELIGR
NTSIVVAGTH GKTTTTSIIA WLLESGGLKP GFLVGGIPEN FGIGCRPSGR SEAGFFVSEG
DEYDTAFFDK RSKFLLYRPD IALINNVEFD HADIFNSLEE IKRSFRLLVN LIPSKGALIV
NGDDPVAMEV AAGARCRLET FGLTEGCDWM AGNIDVGEEG STFDVYYKGS LLQRFHAPLF
GNYNITNTVA SIAVATLAGM TLEQVEEGLP GFLRPKRRME TIGTFEGNIT LVEDFAHHPT
AIRVTLEAIR ERWPRRRILT CFEPRSNTTT RNIFQDELAA CFGPAEVVVM GKVHRPERYG
PGGSLDTGKL KEALEREGKT VFLAGADPDD YPGDIVRFLH ENLQPNDVVL MLTNGSFAGL
KSAFTESFQK K